RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 HTR3AP46098 478 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 TGM4P49221 684 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 ARHGAP1Q07960 439 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 POM121L1PQ3SYA9 428 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 CYP27C1Q4G0S4 372 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 POMZP3Q6PJE2 187 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 CLEC14AQ86T13 490 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 TMEM150AQ86TG1 271 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 RASGRP3Q8IV61 690 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 OR9Q2Q8NGE9 314 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 OR52B6Q8NGF0 335 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 OR10G6Q8NH81 332 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 ACOT11Q8WXI4 607 aaPredicted RBP6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 MARC2Q969Z3 335 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC22A18Q96BI1 424 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 FOXRED1Q96CU9 486 aaPredicted RBP6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 ZNF578Q96N58 590 aaPredicted RBP6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 FIZ1Q96SL8 496 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 SLC5A7Q9GZV3 580 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 OR51B5Q9H339 312 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 NDRG3Q9UGV2 375 aa6.96□□□□□ -1.29
UBE2D3-224ENST00000508474 RPS10-NUDT3A0A1W2PQS6 291 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TO15178 435 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 MT-ND4P03905 459 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TCRBP04435 133 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 HCKP08631 526 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 OR12D1P0DN82 309 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 IL12BP29460 328 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 AKT2P31751 481 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SSTP61278 116 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 RNF212Q495C1 297 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 CARD16Q5EG05 197 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 FRMPD2BQ6IN97 320 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TPRG1Q6ZUI0 275 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 ABHD13Q7L211 337 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 LRRC56Q8IYG6 542 aaPredicted RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC22A15Q8IZD6 547 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TCTE3Q8IZS6 198 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM145Q8NBT3 493 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 FBXO15Q8NCQ5 510 aaPredicted RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC41A3Q96GZ6 507 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 DCLRE1CQ96SD1 692 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 MICU1Q9BPX6 476 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TRMT61BQ9BVS5 477 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 CENPMQ9NSP4 180 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 LRFN1Q9P244 771 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 A0A1W2PPK0 400 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF705GA8MUZ8 300 aaPredicted RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SERPINF1P36955 418 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 MGAT3Q09327 533 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SELENBP1Q13228 472 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 PTPRRQ15256 657 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 RBMS2Q15434 407 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 C3orf38Q5JPI3 329 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SPIN3Q5JUX0 258 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 UBE2NLQ5JXB2 153 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 NADSYN1Q6IA69 706 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM200AQ86VY9 491 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 AMZ2Q86W34 360 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 DCUN1D3Q8IWE4 304 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 DYNC2LI1Q8TCX1 351 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM174Q8WUU8 243 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 RNF141Q8WVD5 230 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF558Q96NG5 402 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 HIST1H2AAQ96QV6 131 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 C12orf57Q99622 126 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 CENPOQ9BU64 300 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 RXFP3Q9NSD7 469 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 LUZP4Q9P127 313 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SCML2Q9UQR0 700 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 RASD1Q9Y272 281 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 YARS2Q9Y2Z4 477 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 PRELID3BQ9Y3B1 194 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 MYH7P12883 1935 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TRAV18A0A075B6X5 111 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 FAM230AA0A1W2PPH8 454 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 GAPDHSO14556 408 aaPredicted RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 ERI3O43414 337 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 UGDHO60701 494 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 UBL3O95164 117 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 LATS1O95835 1130 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SYPP08247 313 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 ITGA5P08648 1049 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 CD3GP09693 182 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 SBK2P0C263 348 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 OR4Q2P0C623 313 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 KCNE1P15382 129 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 JUNDP17535 347 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 AMY2BP19961 511 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 BDKRB2P30411 391 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 CD52P31358 61 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 GZMKP49863 264 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 PSPHP78330 225 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 RGMBQ6NW40 437 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF585AQ6P3V2 769 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 BRAT1Q6PJG6 821 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 TSSK4Q6SA08 328 aa6.96□□□□□ -1.3
UBE2D3-224ENST00000508474 LYPD4Q6UWN0 246 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms