RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 NUBP2Q9Y5Y2 271 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 CDH10Q9Y6N8 788 aa4.69□□□□□ -1.66
HMGB3P16-201ENST00000508037 TTC3P53804 2025 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 A0A0G2JPF8 293 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC5A10A0PJK1 596 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TSPAN11A1L157 253 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR5K3A6NET4 321 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 HEPACAM2A8MVW5 462 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 A8MX80 341 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 UPK3BL1B0FP48 263 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ISM1B1AKI9 464 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 HNRNPCL2B2RXH8 293 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 HNRNPCL3B7ZW38 293 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 WASH3PC4AMC7 463 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 UPK3BL2E5RIL1 263 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SYT5O00445 386 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRRG1O14668 218 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 FFAR1O14842 300 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PLD2O14939 933 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 BET1O15155 118 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TSPAN6O43657 245 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM127O75204 238 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 STX11O75558 287 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SERPINI2O75830 405 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RGS9O75916 674 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC22A5O76082 557 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 UBXN7O94888 489 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ABLIM3O94929 683 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 C1orf105O95561 183 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ETHE1O95571 254 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OLFM2O95897 454 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC16A8O95907 504 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SOD1P00441 154 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 FGBP02675 491 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 C1QCP02747 245 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RPN2P04844 631 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 KLK1P06870 262 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TPOP07202 933 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 GALTP07902 379 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 IL3P08700 152 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 CLEC2LP0C7M8 214 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 HNRNPCL4P0DMR1 293 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 NR2F1P10589 423 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 DRD2P14416 443 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SELPP16109 830 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 APEX1P27695 318 aaKnown RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC6A1P30531 599 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 STAT5AP42229 794 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 BDKRB1P46663 353 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RFX3P48380 749 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 CDH11P55287 796 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 LIM2P55344 173 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PER3P56645 1201 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TAS2R43P59537 309 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TBPL1P62380 186 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ABATP80404 500 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SHC2P98077 582 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RGS1Q08116 209 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 LMAN2Q12907 356 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PUM1Q14671 1186 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRAM2Q15035 370 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 MLC1Q15049 377 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 LEXMQ3ZCV2 418 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SMUG1Q53HV7 270 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 Q5BKY6 102 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRRT3Q5FWE3 981 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF648Q5T619 568 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 HBMQ6B0K9 141 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SDE2Q6IQ49 451 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PYHIN1Q6K0P9 492 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TCTN3Q6NUS6 607 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ANKRD54Q6NXT1 300 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PODNL1Q6PEZ8 512 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PRSS55Q6UWB4 352 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 LCTLQ6UWM7 567 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM107Q6UX40 140 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 PAMR1Q6UXH9 720 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RSPO2Q6UXX9 243 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMIGD1Q6UXZ0 262 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RASSF6Q6ZTQ3 369 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ARMCX6Q7L4S7 300 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 C6orf120Q7Z4R8 191 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 FGD2Q7Z6J4 655 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC51BQ86UW2 128 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 AMIGO1Q86WK6 493 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 MARCH9Q86YJ5 346 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 GID4Q8IVV7 300 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ADGRF3Q8IZF5 1079 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 C9orf62Q8N4C0 152 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 RNF175Q8N4F7 328 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TBC1D19Q8N5T2 526 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 HORMAD2Q8N7B1 307 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 POGLUT1Q8NBL1 392 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM145Q8NBT3 493 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 NLGN4YQ8NFZ3 816 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR4K5Q8NGD3 323 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR9A1PQ8NGU1 263 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR52P1PQ8NH57 321 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR5AK3PQ8NH89 298 aa4.68□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF461Q8TAF7 563 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms