RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 THOC6Q86W42 341 aaKnown RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 C7orf57Q8NEG2 295 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 KRT35Q92764 455 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 GFM2Q969S9 779 aaKnown RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 MUCL1Q96DR8 90 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 DTNBP1Q96EV8 351 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 GMPPAQ96IJ6 420 aaPredicted RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 NAP1L5Q96NT1 182 aaPredicted RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 SNX18Q96RF0 628 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 F2RL3Q96RI0 385 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 VRK1Q99986 396 aaPredicted RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 SUCNR1Q9BXA5 334 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 OSBPL8Q9BZF1 889 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 LYRM4Q9HD34 91 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 PRDM7Q9NQW5 492 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 TREX1Q9NSU2 369 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 DDX28Q9NUL7 540 aaKnown RBP6.39□□□□□ -1.39
VCAN-207ENST00000507162 KLHL42Q9P2K6 505 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 SLC17A6Q9P2U8 582 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 PPIAL4AQ9Y536 164 aa6.39□□□□□ -1.39
VCAN-207ENST00000507162 HEATR1Q9H583 2144 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 PRAMEF25A6NGN4 478 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 WASHC1A8K0Z3 465 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ERI2A8K979 691 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 PIN1P1O15428 100 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 PJA2O43164 708 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 SS18L1O75177 396 aaPredicted RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 SH3BGRLO75368 114 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 GCM2O75603 506 aaPredicted RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 PPM1BO75688 479 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 SNUPNO95149 360 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 AIFM1O95831 613 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 BCL10O95999 233 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 CLPSP04118 112 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 NUDT17P0C025 328 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 EPB42P16452 691 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 HK1P19367 917 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ARNTP27540 789 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 EIF1AXP47813 144 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 CDH15P55291 814 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 B3GALT5-AS1P59052 145 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 COPS2P61201 443 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 UBA52P62987 128 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 PHC1P78364 1004 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 IGLV3-21P80748 117 aaPredicted RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 ZBED6P86452 979 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 GUCA2AQ02747 115 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 DHX9Q08211 1270 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 BIKQ13323 160 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 SNTA1Q13424 505 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 CCNIQ14094 377 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ACAP2Q15057 778 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 SLC18A3Q16572 532 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 OCLNQ16625 522 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 VAX1Q5SQQ9 334 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 MFSD12Q6NUT3 480 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 NEPROQ6NW34 567 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 FAHD2BQ6P2I3 314 aaPredicted RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 ZNF549Q6P9A3 640 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 GLCCI1Q86VQ1 547 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ST13P4Q8IZP2 240 aaPredicted RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 CEP112Q8N8E3 955 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ANKS4BQ8N8V4 417 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ZDHHC22Q8N966 263 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 BBOF1Q8ND07 529 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 TTLQ8NG68 377 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 OR4K17Q8NGC6 315 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 CD200R1Q8TD46 325 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 HPS1Q92902 700 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 HGDQ93099 445 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ADIPOR1Q96A54 375 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ZBTB8AQ96BR9 441 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 FAHD2AQ96GK7 314 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 RADILQ96JH8 1075 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 HBEGFQ99075 208 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 C1QTNF5Q9BXJ0 243 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 TRIM54Q9BYV2 358 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 RPF2Q9H7B2 306 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 LPAR2Q9HBW0 351 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 ESM1Q9NQ30 184 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 FBXO6Q9NRD1 293 aaPredicted RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 SYBUQ9NX95 663 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 IKZF3Q9UKT9 509 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 SLC22A14Q9Y267 594 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 MRPS18CQ9Y3D5 142 aaKnown RBP6.38□□□□□ -1.39
VCAN-207ENST00000507162 ATP23Q9Y6H3 246 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 KCNE2Q9Y6J6 123 aa6.38□□□□□ -1.39
VCAN-207ENST00000507162 WNK2Q9Y3S1 2297 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 LOC100653049A0A140TA62 436 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 RTCAO00442 366 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 EIF1AYO14602 144 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 AKR1B10O60218 316 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 PRKRAO75569 313 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 CLEC3AO75596 197 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 ZNF189O75820 626 aaPredicted RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 KRT34O76011 436 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 TJP3O95049 919 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 SYNGR4O95473 234 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 CLDN9O95484 217 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms