RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 C11orf24Q96F05 449 aaPredicted RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 SPATA13Q96N96 652 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 DEFB118Q96PH6 123 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 FTHL17Q9BXU8 183 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 SIRPDQ9H106 197 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 TIGARQ9NQ88 270 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 PRODH2Q9UF12 536 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 DNPEPQ9ULA0 475 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 SLC9A8Q9Y2E8 581 aa2.08□□□□□ -2.08
GYPB-207ENST00000506679 KLF2Q9Y5W3 355 aaPredicted RBP2.08□□□□□ -2.08
GYPB-207ENST00000506679 KLF18A0A0U1RQI7 1052 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 LRIT2A6NDA9 550 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 A8MX80 341 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 LY6G6DO95868 133 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 P0C879 139 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 PGAM2P15259 253 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 HLA-DPA1P20036 260 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 AZU1P20160 251 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 AHCYP23526 432 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 GDF1P27539 372 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 TMOD1P28289 359 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 COPB2P35606 906 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 MAGEA9P43362 315 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 NT5C2P49902 561 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 YBEYP58557 167 aaPredicted RBP2.07□□□□□ -2.08
GYPB-207ENST00000506679 UBXN1Q04323 297 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 GFPT1Q06210 699 aaPredicted RBP2.07□□□□□ -2.08
GYPB-207ENST00000506679 ZIC1Q15915 447 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 AGKQ53H12 422 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 CMPK2Q5EBM0 449 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 ETFRF1Q6IPR1 90 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 FAM159AQ6UWV7 190 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 RABEPKQ7Z6M1 372 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 LRRC17Q8N6Y2 441 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 Q8N9G6 341 aaPredicted RBP2.07□□□□□ -2.08
GYPB-207ENST00000506679 OR4F17Q8NGA8 305 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 BADQ92934 168 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 VSIG2Q96IQ7 327 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 OR4F4Q96R69 305 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 COQ7Q99807 217 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 NDUFAF3Q9BU61 184 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 APOOQ9BUR5 198 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 ACAT2Q9BWD1 397 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 YTHDF1Q9BYJ9 559 aaKnown RBP2.07□□□□□ -2.08
GYPB-207ENST00000506679 DDX47Q9H0S4 455 aaKnown RBP2.07□□□□□ -2.08
GYPB-207ENST00000506679 ABCG4Q9H172 646 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 OPN3Q9H1Y3 402 aaPredicted RBP2.07□□□□□ -2.08
GYPB-207ENST00000506679 TNMDQ9H2S6 317 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 HOMER3Q9NSC5 361 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 KCNN3Q9UGI6 736 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 IL19Q9UHD0 177 aa2.07□□□□□ -2.08
GYPB-207ENST00000506679 TDRD6O60522 2096 aaKnown RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 FRG2CA6NGY1 282 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 FBLL1A6NHQ2 334 aaKnown RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 EFCAB7A8K855 629 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 NPIPA2E9PIF3 369 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 ADAM12O43184 909 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 GPAA1O43292 621 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 NUDT21O43809 227 aaKnown RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 BCAS2O75934 225 aaPredicted RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 SLC2A10O95528 541 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 BAG2O95816 211 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 IGSF6O95976 241 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 PGK2P07205 417 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 SLC35E2P0CK97 266 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 CYP11B1P15538 503 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 GNSP15586 552 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 XCR1P46094 333 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 RIPPLY3P57055 190 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 KRTAP12-2P59991 146 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 ERVPABLB-1P60509 514 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 NDPQ00604 133 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 CBX3Q13185 183 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 SLC10A1Q14973 349 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 GSG1Q2KHT4 349 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 TTC31Q49AM3 519 aaPredicted RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 LIPKQ5VXJ0 399 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 PRR5LQ6MZQ0 368 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 LEG1Q6P5S2 330 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 PAQR9Q6ZVX9 377 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 GOLGA7Q7Z5G4 137 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 UNC5CLQ8IV45 518 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 UBQLNLQ8IYU4 475 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 BATF2Q8N1L9 274 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 DQX1Q8TE96 717 aaKnown RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 U2AF1L4Q8WU68 220 aaKnown RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 TFB1MQ8WVM0 346 aaKnown RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 ATP6V0A1Q93050 837 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 FAF2Q96CS3 445 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 TSPAN18Q96SJ8 248 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 HCAR1Q9BXC0 346 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 ZNF275Q9NSD4 429 aaPredicted RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 ANAPC11Q9NYG5 84 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 NDUFA13Q9P0J0 144 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 MOKQ9UQ07 419 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 DHRS7Q9Y394 339 aa2.06□□□□□ -2.08
GYPB-207ENST00000506679 SPAG9O60271 1321 aaKnown RBP2.06□□□□□ -2.08
GYPB-207ENST00000506679 TRBV7-9A0A0J9YWB2 115 aa2.05□□□□□ -2.08
GYPB-207ENST00000506679 A0A0U1RQG5 324 aaPredicted RBP2.05□□□□□ -2.08
GYPB-207ENST00000506679 G3V3Y1 287 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms