RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 SIRT5Q9NXA8 310 aa13.14□□□□□ -0.31
CDC42SE2-209ENST00000506419 PRODH2Q9UF12 536 aa13.14□□□□□ -0.31
CDC42SE2-209ENST00000506419 EXO1Q9UQ84 846 aaKnown RBP13.14□□□□□ -0.31
CDC42SE2-209ENST00000506419 SYT5O00445 386 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 ACOX3O15254 700 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 ENO1P06733 434 aaKnown RBP13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 KRT15P19012 456 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 TIA1P31483 386 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 MASP1P48740 699 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 NAGLUP54802 743 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 DCAF7P61962 342 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 RPP38P78345 283 aaKnown RBP13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 TESK1Q15569 626 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 ACSF3Q4G176 576 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 ANGPTL8Q6UXH0 198 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 ZYG11AQ6WRX3 759 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 OR1J4Q8NGS1 313 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 METTL7AQ9H8H3 244 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 SLC35C2Q9NQQ7 365 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 HCFC1P51610 2035 aa13.13□□□□□ -0.31
CDC42SE2-209ENST00000506419 GNG14A0A1W2PPG7 69 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 FRG2CA6NGY1 282 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 MYO1GB0I1T2 1018 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 B4DXG7 233 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 SNPHO15079 494 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 TSPAN2O60636 221 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 PLIN3O60664 434 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 REM1O75628 298 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 ANXA4P09525 319 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 MYL2P10916 166 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 CORO7P57737 925 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 C2orf80Q0P641 193 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 PLCXD2Q0VAA5 305 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 HEPACAMQ14CZ8 416 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 TOMM20Q15388 145 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 SLC25A35Q3KQZ1 300 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 SPIN4Q56A73 249 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 NPSR1Q6W5P4 371 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 TRIM46Q7Z4K8 759 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 WDR53Q7Z5U6 358 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 CLYBLQ8N0X4 340 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 RELL2Q8NC24 303 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 FAM83FQ8NEG4 500 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 OR7G2Q8NG99 324 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 OR4N2Q8NGD1 307 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 ABTB1Q969K4 478 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 VSTM2LQ96N03 204 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 BTBD9Q96Q07 612 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 SERHLQ9NQF3 203 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 PFDN4Q9NQP4 134 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 STK38LQ9Y2H1 464 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 CCL27Q9Y4X3 112 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 FREM3P0C091 2139 aa13.12□□□□□ -0.31
CDC42SE2-209ENST00000506419 OR6C70A6NIJ9 312 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 HSPB2A8KAH6 182 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 C17orf51A8MQB3 221 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 PLOD3O60568 738 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 CDH16O75309 829 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 BCAS2O75934 225 aaPredicted RBP13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 DDCP20711 480 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 CRHR1P34998 444 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 TIMP3P35625 211 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 DNAJB13P59910 316 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 SNTA1Q13424 505 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 KIAA0040Q15053 153 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 HSPB2Q16082 182 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 SPDYAQ5MJ70 313 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 NSUN5P2Q63ZY6 315 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 FAM71E1Q6IPT2 247 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 ARSKQ6UWY0 536 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 TDRPQ86YL5 185 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 ERP27Q96DN0 273 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 SLC35A4Q96G79 324 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 COL21A1Q96P44 957 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 ADOQ96SZ5 270 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 ZNF559Q9BR84 538 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 OSBPL11Q9BXB4 747 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 SHCBP1LQ9BZQ2 653 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 FOLH1BQ9HBA9 442 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 OXSMQ9NWU1 459 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 MAPRE3Q9UPY8 281 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 CAMK2AQ9UQM7 478 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 MED12Q93074 2177 aa13.11□□□□□ -0.31
CDC42SE2-209ENST00000506419 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 FAM47E-STBD1D6RA91 191 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 GLRA3O75311 464 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 CBR3O75828 277 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 CPA3P15088 417 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 MPIP34949 423 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 STARP49675 285 aa13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 AGFG1P52594 562 aaKnown RBP13.1□□□□□ -0.31
CDC42SE2-209ENST00000506419 ZNF136P52737 540 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms