RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 OR52H1Q8NGJ2 320 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 GIMAP1Q8WWP7 306 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 CIDECQ96AQ7 238 aaPredicted RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 PPP1R16AQ96I34 528 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 REG4Q9BYZ8 158 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 MYNNQ9NPC7 610 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 ZNF624Q9P2J8 865 aaPredicted RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 PFDN2Q9UHV9 154 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 LIPT1Q9Y234 373 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 SCN5AQ14524 2016 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 LAMA3Q16787 3333 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 A0A0U1RQF3 1178 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 CD160O95971 181 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 ALPIP09923 528 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 TYRP14679 529 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 CD22P20273 847 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 KELP23276 732 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 ITGB8P26012 769 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 SLC1A3P43003 542 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 FLI1Q01543 452 aaPredicted RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 BTN1A1Q13410 526 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 TRAM1Q15629 374 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 CDKN3Q16667 212 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 GSG1Q2KHT4 349 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 PUS10Q3MIT2 529 aaKnown RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 ZNF385BQ569K4 471 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 TPRA1Q86W33 373 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 THOC6Q86W42 341 aaKnown RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 PIAS4Q8N2W9 510 aaPredicted RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 SCRN2Q96FV2 425 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 LYSMD1Q96S90 227 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 TEX12Q9BXU0 123 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 HCN3Q9P1Z3 774 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 ICKQ9UPZ9 632 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 MAP4K5Q9Y4K4 846 aa15.01□□□□□ -0.01
SCLT1-208ENST00000506368 KLF2Q9Y5W3 355 aaPredicted RBP15.01□□□□□ -0.01
SCLT1-208ENST00000506368 TRAV6A0A075B6T7 132 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 A8MXK9 166 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 GTPBP1O00178 669 aaKnown RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 ZNF197O14709 1029 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 SYN3O14994 580 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 RGS9O75916 674 aaPredicted RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 H2AFB2P0C5Z0 115 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 ZNF8P17098 575 aaPredicted RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 ATP5C1P36542 298 aaKnown RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 THPOP40225 353 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 CBX5P45973 191 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 CSNK1DP48730 415 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 RNF144AP50876 292 aaPredicted RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 RPS24P62847 133 aaKnown RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 C1orf53Q5VUE5 145 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 RNF219Q5W0B1 726 aaPredicted RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 C1orf94Q6P1W5 598 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 SLITRK4Q8IW52 837 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 C7orf61Q8IZ16 206 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 EIF4E3Q8N5X7 224 aaKnown RBP15□□□□□ -0.01
SCLT1-208ENST00000506368 OR6M1Q8NGM8 313 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 NR4A3Q92570 626 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 ZNF607Q96SK3 696 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 OR51B5Q9H339 312 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 TTC3P53804 2025 aa15□□□□□ -0.01
SCLT1-208ENST00000506368 KIAA1671Q9BY89 1806 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 NUP214P35658 2090 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-208ENST00000506368 A0A1W2PRB8 838 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 A8MUA0 341 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 PI15O43692 258 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 GLULP15104 373 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 CXCL3P19876 107 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 IFNGR2P38484 337 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 NNMTP40261 264 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 KCNJ5P48544 419 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 DYRK1AQ13627 763 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 DDX39BQ13838 428 aaKnown RBP14.99□□□□□ -0.01
SCLT1-208ENST00000506368 OPCMLQ14982 345 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 PTPRRQ15256 657 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 FAM198BQ6UWH4 519 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 WASH2PQ6VEQ5 465 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 C3P1Q6ZMU1 363 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 ASB18Q6ZVZ8 466 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 TOMM5Q8N4H5 51 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 RPLP0P6Q8NHW5 317 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 SKA2Q8WVK7 121 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-208ENST00000506368 TRIM43Q96BQ3 446 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-208ENST00000506368 LCORQ96JN0 433 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-208ENST00000506368 TMPRSS13Q9BYE2 586 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 SERHL2Q9H4I8 314 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 PCDHB16Q9NRJ7 776 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 MED17Q9NVC6 651 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 HRH3Q9Y5N1 445 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 CEP290O15078 2479 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 SMIM30A4D0T7 59 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 OR6C65A6NJZ3 312 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 OR6C75A6NL08 312 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 UPK3BL1B0FP48 263 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 UPK3BL2E5RIL1 263 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 FAM227AF5H4B4 570 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 FOXE1O00358 373 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-208ENST00000506368 LDOC1O95751 146 aaPredicted RBP14.99□□□□□ -0.01
SCLT1-208ENST00000506368 SYN1P17600 705 aa14.99□□□□□ -0.01
SCLT1-208ENST00000506368 CALCRP30988 508 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms