RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NIPA2Q8N8Q9 360 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ANKRD53Q8N9V6 530 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 FAM47BQ8NA70 645 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 OR4M2Q8NGB6 313 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 OR4K1Q8NGD4 311 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 OR8K1Q8NGG5 319 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 DOK4Q8TEW6 326 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 HGDQ93099 445 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 KISS1RQ969F8 398 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 LRRC45Q96CN5 670 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ITPKCQ96DU7 683 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 FBXO17Q96EF6 278 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 MARS2Q96GW9 593 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SENP5Q96HI0 755 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SFXN2Q96NB2 322 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 NODALQ96S42 347 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 DNAJC7Q99615 494 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 EBNA1BP2Q99848 306 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 APOL2Q9BQE5 337 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 FERMT1Q9BQL6 677 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 FSD1LQ9BXM9 530 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ALOXE3Q9BYJ1 711 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 FAM129AQ9BZQ8 928 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 WWTR1Q9GZV5 400 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 KCNF1Q9H3M0 494 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PLK3Q9H4B4 646 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PRDM13Q9H4Q3 707 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 NARFLQ9H6Q4 476 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ACTR8Q9H981 624 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 GP6Q9HCN6 339 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SLC52A3Q9NQ40 469 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 RYDENQ9NUL5 291 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PLEK2Q9NYT0 353 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 TESQ9UGI8 421 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 MGAT4BQ9UQ53 548 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 EMC9Q9Y3B6 208 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SPACA6W5XKT8 324 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC162PA2VCL2 907 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 MROH6A6NGR9 719 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 OR5H1A6NKK0 313 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 C3orf70A6NLC5 250 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ATP6V1G2-DDX39BF2Z307 99 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 PSMD12O00232 456 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TP53I11O14683 189 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 PSTPIP1O43586 416 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CTNSO60931 367 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 LDB3O75112 727 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF189O75820 626 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 LYZL6O75951 148 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 PROSCO94903 275 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SLITRK5O94991 958 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 MPZL1O95297 269 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CRTAMO95727 393 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TBX6O95947 436 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 IFNA16P05015 189 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ABCB1P08183 1280 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TMEM253P0C7T8 217 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SAGP10523 405 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 BMP4P12644 408 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 IFNGR1P15260 489 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 COX5AP20674 150 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 FUT4P22083 530 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TCEA1P23193 301 aaKnown RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 HRH2P25021 359 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 PTAFRP25105 342 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CTNNA2P26232 953 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 GCKP35557 465 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CETN2P41208 172 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SKIV2L2P42285 1042 aaKnown RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 MSH2P43246 934 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SCTRP47872 440 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 IDH3GP51553 393 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 NAP1L1P55209 391 aaKnown RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 RAB38P57729 211 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TAS2R40P59535 323 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TBPL1P62380 186 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SLC13A2Q13183 592 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ITGADQ13349 1161 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TSTA3Q13630 321 aaPredicted RBP2.88□□□□□ -1.95
TCOF1-208ENST00000506063 KCNJ11Q14654 390 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 SETDB1Q15047 1291 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 EFNB3Q15768 340 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ADIPOQQ15848 244 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TSNAXIP1Q2TAA8 658 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ANKRD20A4Q4UJ75 823 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ELFN2Q5R3F8 820 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ANKRD20A2Q5SQ80 823 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TIMM23BQ5SRD1 257 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 MEI1Q5TIA1 1274 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC181Q5TID7 509 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ANKRD20A1Q5TYW2 823 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ANKRD20A3Q5VUR7 823 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 ZFAND6Q6FIF0 208 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 NIPAL1Q6NVV3 410 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TTC23LQ6PF05 361 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 LCTLQ6UWM7 567 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 TMEM108Q6UXF1 575 aa2.88□□□□□ -1.95
TCOF1-208ENST00000506063 C9orf139Q6ZV77 190 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms