RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CYB561P49447 251 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 TNFSF10P50591 281 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 NR0B1P51843 470 aaKnown RBP11□□□□□ -0.65
PDLIM5-208ENST00000504489 PSPHP78330 225 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 PRR5P85299 388 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 SF3A3Q12874 501 aaKnown RBP eCLIP11□□□□□ -0.65
PDLIM5-208ENST00000504489 RCAN2Q14206 197 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 AGKQ53H12 422 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF468Q5VIY5 522 aaPredicted RBP11□□□□□ -0.65
PDLIM5-208ENST00000504489 ZCCHC12Q6PEW1 402 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 OPN5Q6U736 354 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 SPATA21Q7Z572 469 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 CPLX4Q7Z7G2 160 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 ANKRD46Q86W74 232 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 DND1Q8IYX4 353 aaKnown RBP11□□□□□ -0.65
PDLIM5-208ENST00000504489 TAGAPQ8N103 731 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 TMEM156Q8N614 296 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 HORMAD2Q8N7B1 307 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 NUP43Q8NFH3 380 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 ASB15Q8WXK1 588 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 HOXB13Q92826 284 aaPredicted RBP11□□□□□ -0.65
PDLIM5-208ENST00000504489 FAM120BQ96EK7 910 aaKnown RBP11□□□□□ -0.65
PDLIM5-208ENST00000504489 HSPBAP1Q96EW2 488 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 GIMAP5Q96F15 307 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 ELAC2Q9BQ52 826 aaKnown RBP11□□□□□ -0.65
PDLIM5-208ENST00000504489 ITPAQ9BY32 194 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 TRIM4Q9C037 500 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 NXF5Q9H1B4 397 aaKnown RBP11□□□□□ -0.65
PDLIM5-208ENST00000504489 CXorf36Q9H7Y0 433 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 CCDC167Q9P0B6 97 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 B3GNT3Q9Y2A9 372 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 SNX8Q9Y5X2 465 aa11□□□□□ -0.65
PDLIM5-208ENST00000504489 HEATR5AQ86XA9 2040 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF407Q9C0G0 2248 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 FRG2CA6NGY1 282 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CAPN14A8MX76 684 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 SNX3O60493 162 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ERN1O75460 977 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 OR6B1O95007 311 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CPSF4O95639 269 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ABCB1P08183 1280 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CT45A8P0DMV1 189 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CT45A9P0DMV2 189 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 NAGAP17050 411 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ADSLP30566 484 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 SOX3P41225 446 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 MAP3K8P41279 467 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 NRG3P56975 720 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 KCNK10P57789 538 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 OC90Q02509 493 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 KLRB1Q12918 225 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 TLR1Q15399 786 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 MAPKAPK3Q16644 382 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF791Q3KP31 576 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 NADK2Q4G0N4 442 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 SOWAHCQ53LP3 525 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CT45A2Q5DJT8 189 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 EXOSC6Q5RKV6 272 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 BHLHB9Q6PI77 547 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 LYPD8Q6UX82 237 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF227Q86WZ6 799 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 TEX19Q8NA77 164 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 MDS2Q8NDY4 140 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CATSPER1Q8NEC5 780 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 OR56A1Q8NGH5 318 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 OR4A15Q8NGL6 344 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 TSPEARQ8WU66 669 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 PNPLA2Q96AD5 504 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 MS4A4EQ96PG1 132 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 SIGLEC12Q96PQ1 595 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 LMF2Q9BU23 707 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 RMND5AQ9H871 391 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 SLC52A3Q9NQ40 469 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 SERHLQ9NQF3 203 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 SAR1AQ9NR31 198 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ZCCHC3Q9NUD5 404 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 LRFN1Q9P244 771 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 ADAM21Q9UKJ8 722 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 PCDHGB6Q9Y5F9 930 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 CSAG2Q9Y5P2 127 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 NPFFR2Q9Y5X5 522 aa10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 PRRC2CQ9Y520 2896 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-208ENST00000504489 TRAV17A0A0B4J275 112 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 CCDC154A6NI56 674 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 A8MVJ9 347 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 SHOX2O60902 331 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 NME6O75414 186 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 NEURL1O76050 574 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 F10P00742 488 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 FBXO45P0C2W1 286 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 ZCCHC18P0CG32 403 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 UQCRC2P22695 453 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 TRPC1P48995 793 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 PRIM2P49643 509 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 ST13P50502 369 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 PRKAG1P54619 331 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 PSG6Q00889 435 aa10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF155Q12901 538 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-208ENST00000504489 ZNF169Q14929 603 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms