RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SLC25A23Q9BV35 468 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 RMND5AQ9H871 391 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 ANKRA2Q9H9E1 313 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 C3orf14Q9HBI5 128 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 SIRT3Q9NTG7 399 aaPredicted RBP9.3□□□□□ -0.92
NUP54-203ENST00000504173 PRODH2Q9UF12 536 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 ZNF639Q9UID6 485 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 TEKT2Q9UIF3 430 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 BTNL2Q9UIR0 455 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 CFL2Q9Y281 166 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 CAPN7Q9Y6W3 813 aa9.3□□□□□ -0.92
NUP54-203ENST00000504173 DYTNA2CJ06 578 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 MKRN2OSH3BPM6 223 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 UPK1AO00322 258 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 NDUFAB1O14561 156 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 EMC8O43402 210 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 PRKNO60260 465 aaPredicted RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 SCN2BO60939 215 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CEACAM4O75871 244 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ALPPP05187 535 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CAPN3P20807 821 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ADSLP30566 484 aaPredicted RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 SOX18P35713 384 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CCT3P49368 545 aaKnown RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 PRKAG1P54619 331 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 RNF4P78317 190 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 PRR5P85299 388 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ZNF155Q12901 538 aaPredicted RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 DUSP8Q13202 625 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 EBPQ15125 230 aaKnown RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 MAPRE2Q15555 327 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 VPS26BQ4G0F5 336 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CRB2Q5IJ48 1285 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 C6orf10Q5SRN2 563 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ABHD17BQ5VST6 288 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 HLA-DQA1Q5Y7H0 255 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 B3GNTL1Q67FW5 361 aaPredicted RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 DNAJC14Q6Y2X3 702 aaPredicted RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 TMEM64Q6YI46 380 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 MTDHQ86UE4 582 aaKnown RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 RPS19BP1Q86WX3 136 aaKnown RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 OR2L13Q8N349 312 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CCDC197Q8NCU1 140 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 SIMC1Q8NDZ2 872 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 NUP43Q8NFH3 380 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 OR8K3Q8NH51 312 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 C16orf52Q8NHV5 167 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 PSMA8Q8TAA3 256 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 NUBPLQ8TB37 319 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 MARVELD3Q96A59 401 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ABHD17AQ96GS6 310 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ITCHQ96J02 903 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ZNF354BQ96LW1 612 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CCDC115Q96NT0 180 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 PANX1Q96RD7 426 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 WWTR1Q9GZV5 400 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CDCP1Q9H5V8 836 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 CXorf36Q9H7Y0 433 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ZCCHC3Q9NUD5 404 aaKnown RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 TAS2R9Q9NYW1 312 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 ARMCX1Q9P291 453 aa9.29□□□□□ -0.92
NUP54-203ENST00000504173 C19orf53Q9UNZ5 99 aaPredicted RBP9.29□□□□□ -0.92
NUP54-203ENST00000504173 RNF103-CHMP3A0A140T963 221 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 C2orf92A0A1B0GVN3 265 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 A0A1W2PP18 115 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 WWP2O00308 870 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 RFXANKO14593 260 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ANGPT2O15123 496 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 SLC22A2O15244 555 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 NME6O75414 186 aaPredicted RBP9.28□□□□□ -0.92
NUP54-203ENST00000504173 DCTN3O75935 186 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ANP32DO95626 131 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 SNRPB2P08579 225 aaKnown RBP9.28□□□□□ -0.92
NUP54-203ENST00000504173 CD1EP15812 388 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 SOX11P35716 441 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 CDKN2CP42773 168 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 EMDP50402 254 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 MLF1P58340 268 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 TP53BP2Q13625 1128 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 TESK1Q15569 626 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 MEP1AQ16819 746 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ACER2Q5QJU3 275 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 TCTN3Q6NUS6 607 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 H3F3CQ6NXT2 135 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 BHLHB9Q6PI77 547 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 SLC2A7Q6PXP3 512 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ISLR2Q6UXK2 745 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 SPNS3Q6ZMD2 512 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 LINC00696Q6ZRV3 163 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ZNF621Q6ZSS3 439 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 LGI4Q8N135 537 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 TRIML2Q8N7C3 387 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 OR56A1Q8NGH5 318 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 OR5AK3PQ8NH89 298 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 SFXN5Q8TD22 340 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 BCAS4Q8TDM0 211 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 TSPEARQ8WU66 669 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 PSMF1Q92530 271 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 MOAP1Q96BY2 351 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 FAM120BQ96EK7 910 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms