RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MRPS35P82673 323 aaKnown RBP10.93□□□□□ -0.66
MED28-203ENST00000503945 TFF3Q07654 80 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 PLCXD2Q0VAA5 305 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 NNATQ16517 81 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 IMPG1Q17R60 797 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ERCC6LQ2NKX8 1250 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 SLC25A35Q3KQZ1 300 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 RIPPLY2Q5TAB7 128 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 VASNQ6EMK4 673 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 TMEM81Q6P7N7 255 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 GALNT18Q6P9A2 607 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ANGPTL8Q6UXH0 198 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ZYG11AQ6WRX3 759 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 LIX1LQ8IVB5 337 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ULK2Q8IYT8 1036 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ZNF675Q8TD23 568 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 MZB1Q8WU39 189 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.93□□□□□ -0.66
MED28-203ENST00000503945 KAT2AQ92830 837 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ABTB1Q969K4 478 aaPredicted RBP10.93□□□□□ -0.66
MED28-203ENST00000503945 LRRC46Q96FV0 321 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 KCNA7Q96RP8 456 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ZNF559Q9BR84 538 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 ITPAQ9BY32 194 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 SHCBP1LQ9BZQ2 653 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 EPB41L4BQ9H329 900 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 RRAGDQ9NQL2 400 aaPredicted RBP10.93□□□□□ -0.66
MED28-203ENST00000503945 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
MED28-203ENST00000503945 SIRT5Q9NXA8 310 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 TAS2R9Q9NYW1 312 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 EHD3Q9NZN3 535 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 KLRF1Q9NZS2 232 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 SENP1Q9P0U3 644 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 EXO1Q9UQ84 846 aaKnown RBP10.93□□□□□ -0.66
MED28-203ENST00000503945 DTX4Q9Y2E6 619 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 C15orf41Q9Y2V0 281 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 NF1P21359 2839 aa10.93□□□□□ -0.66
MED28-203ENST00000503945 MTORP42345 2549 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 PRRC2AP48634 2157 aaKnown RBP10.92□□□□□ -0.66
MED28-203ENST00000503945 C2orf72A6NCS6 295 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 FRG2CA6NGY1 282 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 OR6C70A6NIJ9 312 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 SYT5O00445 386 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 UBFD1O14562 309 aaKnown RBP10.92□□□□□ -0.66
MED28-203ENST00000503945 COPEO14579 308 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 TO15178 435 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 SHBGP04278 402 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 IGFBP2P18065 325 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 BMP7P18075 431 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 DDCP20711 480 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 TIMP3P35625 211 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 DNAJB13P59910 316 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 DUSP2Q05923 314 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 LTB4RQ15722 352 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 ZNF628Q5EBL2 1059 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 NHSL2Q5HYW2 709 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 WIPI1Q5MNZ9 446 aaPredicted RBP10.92□□□□□ -0.66
MED28-203ENST00000503945 FNDC7Q5VTL7 733 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 SH2D5Q6ZV89 423 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 TRIM46Q7Z4K8 759 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 WDR53Q7Z5U6 358 aaPredicted RBP10.92□□□□□ -0.66
MED28-203ENST00000503945 HOMEZQ8IX15 550 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 SIMC1Q8NDZ2 872 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 OR9A2Q8NGT5 310 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 FAM76AQ8TAV0 307 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 RDH11Q8TC12 318 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 HGDQ93099 445 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 TMBIM1Q969X1 311 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 DTNBP1Q96EV8 351 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 COL21A1Q96P44 957 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 NODALQ96S42 347 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 ADOQ96SZ5 270 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 STMN4Q9H169 189 aaPredicted RBP10.92□□□□□ -0.66
MED28-203ENST00000503945 UBQLN3Q9H347 655 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 GSTO2Q9H4Y5 243 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 OXSMQ9NWU1 459 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 KCNN3Q9UGI6 736 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 CAMK2AQ9UQM7 478 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 SLC6A5Q9Y345 797 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 ITPR3Q14573 2671 aa10.92□□□□□ -0.66
MED28-203ENST00000503945 TLDC2A0PJX2 215 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 SMIM23A6NLE4 172 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 DVL2O14641 736 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 PLOD3O60568 738 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 PLIN3O60664 434 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 UGT2B11O75310 529 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 SEC22BO75396 215 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 ERN1O75460 977 aaKnown RBP10.91□□□□□ -0.66
MED28-203ENST00000503945 ACTL6AO96019 429 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 PROCP04070 461 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 CT45A8P0DMV1 189 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 CT45A9P0DMV2 189 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 UROSP10746 265 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 KRT4P19013 534 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 PTPN6P29350 595 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 SOX18P35713 384 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 PEX19P40855 299 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 HTR6P50406 440 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 PNLIPRP2P54317 469 aa10.91□□□□□ -0.66
MED28-203ENST00000503945 FOXA1P55317 472 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms