RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 YIPF4Q9BSR8 244 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 TRIM45Q9H8W5 580 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-205ENST00000503401 C3orf14Q9HBI5 128 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 GPR55Q9Y2T6 319 aaPredicted RBP15.21■□□□□ 0.03
SCLT1-205ENST00000503401 PCDHGA10Q9Y5H3 936 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 RELNP78509 3460 aa15.21■□□□□ 0.03
SCLT1-205ENST00000503401 PRSS51A0A1B0GVH4 220 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 TTLL8A6PVC2 850 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 SUV39H1O43463 412 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 SP1P08047 785 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 CD46P15529 392 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 LSP1P33241 339 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 CCT3P49368 545 aaKnown RBP15.21■□□□□ 0.02
SCLT1-205ENST00000503401 POLR2JP52435 117 aaKnown RBP15.21■□□□□ 0.02
SCLT1-205ENST00000503401 ARFIP2P53365 341 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 NRG3P56975 720 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 FBXW4P57775 412 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 GNGT1P63211 74 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 PSG6Q00889 435 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 ZNF791Q3KP31 576 aaPredicted RBP15.21■□□□□ 0.02
SCLT1-205ENST00000503401 SPDYE7PQ495Y7 208 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 ANXA8L1Q5VT79 327 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 DESI1Q6ICB0 168 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 GALNTL5Q7Z4T8 443 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 SLC44A2Q8IWA5 706 aaPredicted RBP15.21■□□□□ 0.02
SCLT1-205ENST00000503401 HORMAD2Q8N7B1 307 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 GLB1L3Q8NCI6 653 aaPredicted RBP15.21■□□□□ 0.02
SCLT1-205ENST00000503401 FAM13CQ8NE31 585 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 C17orf47Q8NEP4 570 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 STON2Q8WXE9 905 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 VPS33AQ96AX1 596 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 SPACA9Q96E40 222 aaPredicted RBP15.21■□□□□ 0.02
SCLT1-205ENST00000503401 C16orf58Q96GQ5 468 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 C5orf34Q96MH7 638 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 INPP5KQ9BT40 448 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 FAM107BQ9H098 131 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 EPN3Q9H201 632 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 NEUROD4Q9HD90 331 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 FAM120CQ9NX05 1096 aaKnown RBP15.21■□□□□ 0.02
SCLT1-205ENST00000503401 CCDC167Q9P0B6 97 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 NTMQ9P121 344 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 NPFFR2Q9Y5X5 522 aa15.21■□□□□ 0.02
SCLT1-205ENST00000503401 FRG2CA6NGY1 282 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 G3V3Y1 287 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 FBXO45P0C2W1 286 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 DRD5P21918 477 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 GPR85P60893 370 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 DCAF7P61962 342 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 PRR5P85299 388 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 PMP22Q01453 160 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 TP53BP2Q13625 1128 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 SQLEQ14534 574 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 TIGD2Q4W5G0 525 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 SLC25A25Q6KCM7 469 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 FUNDC1Q8IVP5 155 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 CISD2Q8N5K1 135 aaKnown RBP15.2■□□□□ 0.02
SCLT1-205ENST00000503401 SLC15A4Q8N697 577 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 VPS37AQ8NEZ2 397 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 OR10G3Q8NGC4 313 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 TMBIM1Q969X1 311 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 TMEM125Q96AQ2 219 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 OMA1Q96E52 524 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 SCMH1Q96GD3 660 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 MS4A4EQ96PG1 132 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 PCDHGB4Q9UN71 923 aa15.2■□□□□ 0.02
SCLT1-205ENST00000503401 FAM234BA2RU67 622 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 HMGN2P05204 90 aaKnown RBP15.19■□□□□ 0.02
SCLT1-205ENST00000503401 IL6P05231 212 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 IFI6P09912 130 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 CCL3P10147 92 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 CDKN2CP42773 168 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 PLCXD2Q0VAA5 305 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 GAB1Q13480 694 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 LASP1Q14847 261 aaKnown RBP15.19■□□□□ 0.02
SCLT1-205ENST00000503401 AGKQ53H12 422 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 PSD4Q8NDX1 1056 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 SLC9A6Q92581 669 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 JADE3Q92613 823 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 RABEP2Q9H5N1 569 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 ZNF385DQ9H6B1 395 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 KLHL14Q9P2G3 628 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 MAP10Q9P2G4 905 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 TRIM33Q9UPN9 1127 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 NTNG1Q9Y2I2 539 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 OR10H1Q9Y4A9 318 aa15.19■□□□□ 0.02
SCLT1-205ENST00000503401 SHANK1Q9Y566 2161 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 A0A0G2JMM0 328 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 RNF103-CHMP3A0A140T963 221 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 A0A1W2PPB8 328 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 A0A1W2PRS3 328 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 KIR3DP1A8MWS1 328 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 NR5A2O00482 541 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 ACOX3O15254 700 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 NME2P1O60361 137 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 C1QCP02747 245 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 GSNP06396 782 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 ACP2P11117 423 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 NME2P22392 152 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 GABRA3P34903 492 aa15.18■□□□□ 0.02
SCLT1-205ENST00000503401 MRPL19P49406 292 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms