RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 LRRC32Q14392 662 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 LTB4RQ15722 352 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 RPE65Q16518 533 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SNAPC1Q16533 368 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 DUSP6Q16828 381 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 SLC25A30Q5SVS4 291 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 KIAA1211LQ6NV74 962 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 BHLHB9Q6PI77 547 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 FBXO46Q6PJ61 603 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CCBE1Q6UXH8 406 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 NCCRP1Q6ZVX7 275 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 C11orf74Q86VG3 221 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 TRIM69Q86WT6 500 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 LINC00471Q8N535 108 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 GPR151Q8TDV0 419 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 ASB15Q8WXK1 588 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 TXNDC15Q96J42 360 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 FCRL4Q96PJ5 515 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 KXD1Q9BQD3 176 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 C1QTNF2Q9BXJ5 285 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 MKRN2Q9H000 416 aaKnown RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 C6orf106Q9H6K1 298 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 C3orf14Q9HBI5 128 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CNIH4Q9P003 139 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CRNNQ9UBG3 495 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 GPR52Q9Y2T5 361 aa9.26□□□□□ -0.93
CLIP1-204ENST00000501271 MN1Q10571 1320 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-204ENST00000501271 CPSF4LA6NMK7 179 aaKnown RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SNPHO15079 494 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 RGS5O15539 181 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 LRRTM2O43300 516 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 PROM1O43490 865 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 APODP05090 189 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 CHRM5P08912 532 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 CSNK2A2P19784 350 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ANXA11P50995 505 aaKnown RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SMSP52788 366 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 TAS2R41P59536 307 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 RPS21P63220 83 aaKnown RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ABATP80404 500 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 PRR5P85299 388 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 MAP4K2Q12851 820 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SGCGQ13326 291 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 C1DQ13901 141 aaKnown RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 GNA13Q14344 377 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ZMAT1Q5H9K5 638 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF311Q5JNZ3 666 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ATAT1Q5SQI0 421 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ATAD3BQ5T9A4 648 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 GDPGP1Q6ZNW5 385 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 USP30Q70CQ3 517 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SPATC1Q76KD6 591 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 PRICKLE2Q7Z3G6 844 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 LAX1Q8IWV1 398 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 CELF2-AS1Q8N7Q2 184 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF784Q8NCA9 323 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 NUP43Q8NFH3 380 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 OR14C36Q8NHC7 312 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 PIK3R3Q92569 461 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 KAT2AQ92830 837 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ELP4Q96EB1 424 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF681Q96N22 645 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ARHGDIGQ99819 225 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SARGQ9BW04 601 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 FGF22Q9HCT0 170 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SEMA4GQ9NTN9 838 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 FBXL12Q9NXK8 326 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 KLHL3Q9UH77 587 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 YARS2Q9Y2Z4 477 aaKnown RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 V9GYH0 126 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 FAM170BA6NMN3 283 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 H3BQ06 376 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 PLD2O14939 933 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 EMC8O43402 210 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 GUCY1B2O75343 617 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 CYP7B1O75881 506 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 EML2O95834 649 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ASGR2P07307 311 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ACADMP11310 421 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 TRHRP34981 398 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 TIE1P35590 1138 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 MAGEA8P43361 318 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 HOXC5Q00444 222 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 MLLT1Q03111 559 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-204ENST00000501271 MXD1Q05195 221 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 OR2G6Q5TZ20 316 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF425Q6IV72 752 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 MFSD9Q8NBP5 474 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 KCT2Q8NC54 265 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 PSD4Q8NDX1 1056 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 GANCQ8TET4 914 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 DIO2Q92813 273 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 TMEM203Q969S6 136 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 MOAP1Q96BY2 351 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 GIMAP5Q96F15 307 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 NELL2Q99435 816 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SLC17A9Q9BYT1 436 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 SAP130Q9H0E3 1048 aa9.25□□□□□ -0.93
CLIP1-204ENST00000501271 TPK1Q9H3S4 243 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms