RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 OR5H15A6NDH6 313 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 CXorf65A6NEN9 183 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 TMCO5BA8MYB1 307 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 AKR1B15C9JRZ8 316 aaPredicted RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 H0YIG0 161 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 EIF3FO00303 357 aaPredicted RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 KIF5CO60282 957 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 UGT1A9O60656 530 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 DNAJB6O75190 326 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 VPS26AO75436 327 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 SERPINC1P01008 464 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 APOA4P06727 396 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 UMODP07911 640 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 OR56A5P0C7T3 313 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 NPPBP16860 134 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 POLR2CP19387 275 aaPredicted RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 CD9P21926 228 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ACADLP28330 430 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 CHRNB4P30926 498 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 STIP1P31948 543 aaKnown RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 CDKN2BP42772 138 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 SSR1P43307 286 aaKnown RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 KLK7P49862 253 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ZNF140P52738 457 aaPredicted RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 CTSCP53634 463 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 DRG2P55039 364 aaKnown RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 ABATP80404 500 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 XIAPP98170 497 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 BTKQ06187 659 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 TBL3Q12788 808 aaKnown RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 ABRQ12979 859 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ZBTB17Q13105 803 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 PTK6Q13882 451 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 IHHQ14623 411 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 TMED2Q15363 201 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 EXT1Q16394 746 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 RBBP7Q16576 425 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 NDUFA9Q16795 377 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 PARP6Q2NL67 630 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 SIRPB2Q5JXA9 342 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 MLIPQ5VWP3 458 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ALS2CLQ60I27 953 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 TMEM211Q6ICI0 200 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 LRRC8EQ6NSJ5 796 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 FAM151BQ6UXP7 276 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 RGS9BPQ6ZS82 235 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 RFLNAQ6ZTI6 216 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 CDHR3Q6ZTQ4 885 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 BBS12Q6ZW61 710 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 PID1Q7Z2X4 250 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 CFAP206Q8IYR0 622 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 SLC22A15Q8IZD6 547 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 PAQR4Q8N4S7 273 aaPredicted RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 MARVELD2Q8N4S9 558 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 LMNTD1Q8N9Z9 388 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 TMEM178AQ8NBL3 297 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 OR11G2Q8NGC1 345 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 OR8K1Q8NGG5 319 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 OR2L8Q8NGY9 312 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 GSDMBQ8TAX9 411 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 MCOLN3Q8TDD5 553 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 KRT35Q92764 455 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 KIAA1191Q96A73 305 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 RMDN2Q96LZ7 410 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ADAD1Q96M93 576 aaKnown RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 FOPNLQ96NB1 174 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 QKIQ96PU8 341 aaKnown RBP eCLIP3.62□□□□□ -1.83
USP54-217ENST00000498213 OR2A14Q96R47 310 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 CARD6Q9BX69 1037 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 WWP1Q9H0M0 922 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 PLEKHF2Q9H8W4 249 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 TRIM45Q9H8W5 580 aaPredicted RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 LRRC40Q9H9A6 602 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ARFGAP3Q9NP61 516 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 CUTCQ9NTM9 273 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 HIF1ANQ9NWT6 349 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 KLHL8Q9P2G9 620 aaPredicted RBP3.62□□□□□ -1.83
USP54-217ENST00000498213 CDC23Q9UJX2 597 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 FBXL4Q9UKA2 621 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 SLC12A4Q9UP95 1085 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 ASF1AQ9Y294 204 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 HEY1Q9Y5J3 304 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 USF3Q68DE3 2245 aa3.62□□□□□ -1.83
USP54-217ENST00000498213 KCNE1BA0A087WTH5 132 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 A0A087X0T9 212 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 NSG1A0A0A6YYJ2 146 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 SLC5A10A0PJK1 596 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 GOLGA6L9A6NEM1 432 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 MBD3L5A6NJ08 208 aaPredicted RBP3.61□□□□□ -1.83
USP54-217ENST00000498213 OR2AG2A6NM03 316 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 A8MV72 311 aaPredicted RBP3.61□□□□□ -1.83
USP54-217ENST00000498213 BTNL10A8MVZ5 291 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 NPIPA5E9PKD4 350 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 BTN3A3O00478 584 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 GAPDHSO14556 408 aaPredicted RBP3.61□□□□□ -1.83
USP54-217ENST00000498213 RASGRF2O14827 1237 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 TNFRSF13BO14836 293 aaPredicted RBP3.61□□□□□ -1.83
USP54-217ENST00000498213 TTI1O43156 1089 aa3.61□□□□□ -1.83
USP54-217ENST00000498213 DHHO43323 396 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms