RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 CCDC115Q96NT0 180 aa14.77□□□□□ -0.05
SSBP1-214ENST00000498107 NXF5Q9H1B4 397 aaKnown RBP14.77□□□□□ -0.05
SSBP1-214ENST00000498107 ANKRA2Q9H9E1 313 aa14.77□□□□□ -0.05
SSBP1-214ENST00000498107 SIRT3Q9NTG7 399 aaPredicted RBP14.77□□□□□ -0.05
SSBP1-214ENST00000498107 ZCCHC3Q9NUD5 404 aaKnown RBP14.77□□□□□ -0.05
SSBP1-214ENST00000498107 BTNL2Q9UIR0 455 aa14.77□□□□□ -0.05
SSBP1-214ENST00000498107 MRTO4Q9UKD2 239 aaKnown RBP14.77□□□□□ -0.05
SSBP1-214ENST00000498107 DTX4Q9Y2E6 619 aa14.77□□□□□ -0.05
SSBP1-214ENST00000498107 CSAG2Q9Y5P2 127 aa14.77□□□□□ -0.05
SSBP1-214ENST00000498107 NPFFR2Q9Y5X5 522 aa14.77□□□□□ -0.05
SSBP1-214ENST00000498107 COPG1Q9Y678 874 aaKnown RBP14.77□□□□□ -0.05
SSBP1-214ENST00000498107 NUP214P35658 2090 aaPredicted RBP14.77□□□□□ -0.05
SSBP1-214ENST00000498107 SCN2BO60939 215 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 NEURL1O76050 574 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 NADKO95544 446 aaPredicted RBP14.76□□□□□ -0.05
SSBP1-214ENST00000498107 FBXO45P0C2W1 286 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 IL12AP29459 219 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 LSP1P33241 339 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 KRT20P35900 424 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 HBA1P69905 142 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 MRPS22P82650 360 aaKnown RBP14.76□□□□□ -0.05
SSBP1-214ENST00000498107 C19orf57Q0VDD7 668 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 ZNF468Q5VIY5 522 aaPredicted RBP14.76□□□□□ -0.05
SSBP1-214ENST00000498107 SLC34A3Q8N130 599 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 ZNF843Q8N446 348 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 SIGLEC12Q96PQ1 595 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 LMF2Q9BU23 707 aaKnown RBP14.76□□□□□ -0.05
SSBP1-214ENST00000498107 CXorf36Q9H7Y0 433 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 Q9N2J8 555 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 KLF13Q9Y2Y9 288 aaPredicted RBP14.76□□□□□ -0.05
SSBP1-214ENST00000498107 OR10H1Q9Y4A9 318 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 PCDHGA10Q9Y5H3 936 aa14.76□□□□□ -0.05
SSBP1-214ENST00000498107 GMNCA6NCL1 334 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 TTLL8A6PVC2 850 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 KLRC4-KLRK1H3BQV0 150 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 ABCB7O75027 752 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 SORBS2O94875 1100 aaKnown RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CPSF4O95639 269 aaKnown RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 SP1P08047 785 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CT45A8P0DMV1 189 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CT45A9P0DMV2 189 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 UQCRC2P22695 453 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 ABCD3P28288 659 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 SOAT1P35610 550 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 DGKQP52824 942 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 PSMD4P55036 377 aaKnown RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 GNGT1P63211 74 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 PHC1P78364 1004 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 PLCXD2Q0VAA5 305 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 TP53BP2Q13625 1128 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 NTRK2Q16620 822 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 ZNF791Q3KP31 576 aaPredicted RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CYP27C1Q4G0S4 372 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CT45A2Q5DJT8 189 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CGB2Q6NT52 195 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CPLX4Q7Z7G2 160 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 ANKRD46Q86W74 232 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 SLC44A2Q8IWA5 706 aaPredicted RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CLECL1Q8IZS7 167 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 OR9I1Q8NGQ6 314 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 GOT1L1Q8NHS2 421 aaPredicted RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 SCMH1Q96GD3 660 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 ITCHQ96J02 903 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 PANX1Q96RD7 426 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 SECISBP2Q96T21 854 aaKnown RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 EQTNQ9NQ60 294 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CNIH4Q9P003 139 aa14.75□□□□□ -0.05
SSBP1-214ENST00000498107 FAF1Q9UNN5 650 aaPredicted RBP14.75□□□□□ -0.05
SSBP1-214ENST00000498107 CCDC154A6NI56 674 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 C9JVG2 144 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 SUV39H1O43463 412 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 NME2P1O60361 137 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 ZNF354AO60765 605 aaPredicted RBP14.74□□□□□ -0.05
SSBP1-214ENST00000498107 PPM1BO75688 479 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 PRB1P04280 392 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 P04436 131 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 ALOX5P09917 674 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 NME2P22392 152 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 PSG6Q00889 435 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 EFR3AQ14156 821 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 RCAN2Q14206 197 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 NNATQ16517 81 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 DECR1Q16698 335 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 TIGD2Q4W5G0 525 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 AGKQ53H12 422 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 SLC22A10Q63ZE4 541 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 MFSD12Q6NUT3 480 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 BLOC1S3Q6QNY0 202 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 LYPD8Q6UX82 237 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 NUP54Q7Z3B4 507 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 PSD4Q8NDX1 1056 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 FAM13CQ8NE31 585 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 OMA1Q96E52 524 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 ACTRT3Q9BYD9 372 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 KLHL1Q9NR64 748 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 SACM1LQ9NTJ5 587 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 GIN1Q9NXP7 522 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 CCDC167Q9P0B6 97 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 VPS4AQ9UN37 437 aa14.74□□□□□ -0.05
SSBP1-214ENST00000498107 PCDHGB3Q9Y5G1 929 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms