RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 DOCK9Q9BZ29 2069 aa11.71□□□□□ -0.54
AFF3-215ENST00000498090 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 A0A0G2JPF8 293 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 A0A1W2PPC4 97 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 SLC35F4A4IF30 521 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 METTL12A8MUP2 240 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 HNRNPCL2B2RXH8 293 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 HNRNPCL3B7ZW38 293 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 MYL12BO14950 172 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 SNPHO15079 494 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 ASNA1O43681 348 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 NME6O75414 186 aaPredicted RBP11.7□□□□□ -0.54
AFF3-215ENST00000498090 HNRNPCL4P0DMR1 293 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 NR2F1P10589 423 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 ALOX12P18054 663 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 AVPR2P30518 371 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 TSFMP43897 325 aaKnown RBP11.7□□□□□ -0.54
AFF3-215ENST00000498090 KIAA1024LP59773 190 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 RPL6Q02878 288 aaKnown RBP11.7□□□□□ -0.54
AFF3-215ENST00000498090 RUNX1T1Q06455 604 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 SEC23BQ15437 767 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 SSX1Q16384 188 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 DEF8Q6ZN54 512 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 ABI3BPQ7Z7G0 1075 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 WDR5BQ86VZ2 330 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 C1orf210Q8IVY1 113 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 DTWD2Q8NBA8 298 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 EXOSC8Q96B26 276 aaKnown RBP11.7□□□□□ -0.54
AFF3-215ENST00000498090 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 SLC6A18Q96N87 628 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 WDFY2Q96P53 400 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 INIPQ9NRY2 104 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 NDUFB11Q9NX14 153 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 SSR3Q9UNL2 185 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 PRKAB1Q9Y478 270 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 PLXND1Q9Y4D7 1925 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 EML5Q05BV3 1969 aa11.7□□□□□ -0.54
AFF3-215ENST00000498090 CCDC163A0A0D9SF12 145 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 A0A1W2PPV9 198 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 HYKKA2RU49 373 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 ZNF670-ZNF695F2Z2N8 137 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 PRAMEF26H0Y7S4 382 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 SYT5O00445 386 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 OR1F1O43749 312 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 CEACAM5P06731 702 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 IFNA8P32881 189 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 GPC1P35052 558 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 PCYT1AP49585 367 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 SMSP52788 366 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 RPS26P62854 115 aaKnown RBP11.69□□□□□ -0.54
AFF3-215ENST00000498090 ABATP80404 500 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 CSTF1Q05048 431 aaKnown RBP11.69□□□□□ -0.54
AFF3-215ENST00000498090 ZNF91Q05481 1191 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 PRDX1Q06830 199 aaKnown RBP11.69□□□□□ -0.54
AFF3-215ENST00000498090 TARDBPQ13148 414 aaKnown RBP eCLIP11.69□□□□□ -0.54
AFF3-215ENST00000498090 SRSF5Q13243 272 aaKnown RBP11.69□□□□□ -0.54
AFF3-215ENST00000498090 TP53BP2Q13625 1128 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 TMEM44Q2T9K0 475 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 ENTPD8Q5MY95 495 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 C1orf94Q6P1W5 598 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 MMP21Q8N119 569 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 SLC34A3Q8N130 599 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 SRFBP1Q8NEF9 429 aaKnown RBP11.69□□□□□ -0.54
AFF3-215ENST00000498090 CADM4Q8NFZ8 388 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 OR13H1Q8NG92 308 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 OR56A1Q8NGH5 318 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 PRRC1Q96M27 445 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 IL4I1Q96RQ9 567 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 ACAT2Q9BWD1 397 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 ASPNQ9BXN1 380 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 PCED1AQ9H1Q7 454 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 OR51I1Q9H343 314 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 ANKRD19PQ9H560 264 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 SYNDIG1Q9H7V2 258 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 TRIM45Q9H8W5 580 aaPredicted RBP11.69□□□□□ -0.54
AFF3-215ENST00000498090 RMI1Q9H9A7 625 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 HHATLQ9HCP6 504 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 FGF22Q9HCT0 170 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 LHX9Q9NQ69 397 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 SLC35C2Q9NQQ7 365 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 MRPS18AQ9NVS2 196 aaKnown RBP11.69□□□□□ -0.54
AFF3-215ENST00000498090 CALML5Q9NZT1 146 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 PLAGL1Q9UM63 463 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 A4GNTQ9UNA3 340 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 SLC17A4Q9Y2C5 497 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 GRIP1Q9Y3R0 1128 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 ZNF318Q5VUA4 2279 aa11.69□□□□□ -0.54
AFF3-215ENST00000498090 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 IQCMA0A1B0GVH7 501 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 H7BY64 318 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 RTCAO00442 366 aaKnown RBP11.68□□□□□ -0.54
AFF3-215ENST00000498090 TMPRSS11DO60235 418 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 CSO75390 466 aaKnown RBP11.68□□□□□ -0.54
AFF3-215ENST00000498090 GPX5O75715 221 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 RAB36O95755 333 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 LGI1O95970 557 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 HOXC4P09017 264 aaPredicted RBP11.68□□□□□ -0.54
AFF3-215ENST00000498090 SSR2P43308 183 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 RAB28P51157 221 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms