RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ZNF780BQ9Y6R6 833 aa15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 HRNRQ86YZ3 2850 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC3-207ENST00000497251 GNB5O14775 395 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 ARHGEF9O43307 516 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 SIX3O95343 332 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 GBAP04062 536 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 ALDOAP04075 364 aaKnown RBP15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 HSD3B1P14060 373 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 DRD2P14416 443 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 HSD3B2P26439 372 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 ECHS1P30084 290 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 MRPS22P82650 360 aaKnown RBP15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 PLCXD2Q0VAA5 305 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 MGAT2Q10469 447 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 BCL2A1Q16548 175 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 TAOK1Q7L7X3 1001 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 COMMD6Q7Z4G1 85 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 PTGR2Q8N8N7 351 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 OR52B6Q8NGF0 335 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 IFT81Q8WYA0 676 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 OMA1Q96E52 524 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 MAT2BQ9NZL9 334 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 KLRF1Q9NZS2 232 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 BCAP29Q9UHQ4 241 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 PCTPQ9UKL6 214 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 DLGAP4Q9Y2H0 992 aa15.33■□□□□ 0.04
TRAPPC3-207ENST00000497251 NSD1Q96L73 2696 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 PRAMEF25A6NGN4 478 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 FRG2CA6NGY1 282 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 LRRC14BA6NHZ5 514 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 H0Y3Z8 333 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 HRGP04196 525 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 CNTFP26441 200 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 SRD5A2P31213 254 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 CPA2P48052 419 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 SERPINB9P50453 376 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 TRAF3Q13114 568 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 EFR3AQ14156 821 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 OR2A2Q6IF42 318 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 YRDCQ86U90 279 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 IFNEQ86WN2 208 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 PLCZ1Q86YW0 608 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 PRR22Q8IZ63 422 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 C9orf106Q8NAJ2 232 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 OR14L1PQ8NHC6 308 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 LINC01560Q8TB33 94 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZNF675Q8TD23 568 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 C18orf12Q96KH6 178 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 COL21A1Q96P44 957 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 MRPL57Q9BQC6 102 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 C1QTNF3Q9BXJ4 246 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 MRPL1Q9BYD6 325 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 BRINP2Q9C0B6 783 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 VPS11Q9H270 941 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 CDC42EP4Q9H3Q1 356 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 EIF3LQ9Y262 564 aaKnown RBP15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 JMJD1CQ15652 2540 aa15.32■□□□□ 0.04
TRAPPC3-207ENST00000497251 EXPH5Q8NEV8 1989 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 SH3D21A4FU49 640 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 KDM4EB2RXH2 506 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 LINC01387J3KSC0 135 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 MSTNO14793 375 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 MAGEA12P43365 314 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 GFRA1P56159 465 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 WNT3P56703 355 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 DCST1Q5T197 706 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 TRIM42Q8IWZ5 723 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 TM4SF18Q96CE8 201 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 PHF21BQ96EK2 531 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 SLC35A4Q96G79 324 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 BTBD9Q96Q07 612 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 CDK15Q96Q40 435 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 NODALQ96S42 347 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 PIP5K1AQ99755 562 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 TUBA1CQ9BQE3 449 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 ITPAQ9BY32 194 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 TAS2R10Q9NYW0 307 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 PACSIN3Q9UKS6 424 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 SLC12A4Q9UP95 1085 aa15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 GPR55Q9Y2T6 319 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC3-207ENST00000497251 A0A1W2PS29 197 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 A8MXE2 369 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 UGT2B11O75310 529 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 ERAL1O75616 437 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 INHBAP08476 426 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 KRT20P35900 424 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 FEN1P39748 380 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 PTGDSP41222 190 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 GSTM5P46439 218 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 EMDP50402 254 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 EEFSECP57772 596 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 HMGCS1Q01581 520 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 GALNT1Q10472 559 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 FGFBP1Q14512 234 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 UAP1Q16222 522 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 MED12LQ86YW9 2145 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 IFT20Q8IY31 132 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 LRRC75A-AS1Q8N1F1 130 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 WDSUB1Q8N9V3 476 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms