RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 PSMA8Q8TAA3 256 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 SAP25Q8TEE9 199 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 RBCK1Q9BYM8 510 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 PEX12O00623 359 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 P2RX6O15547 441 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 SLC25A12O75746 678 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 PRKAR1BP31321 381 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 CCL7P80098 99 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 QSOX2Q6ZRP7 698 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 C10orf53Q8N6V4 93 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 OR52R1Q8NGF1 315 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 KIAA1143Q96AT1 154 aaPredicted RBP7.85□□□□□ -1.15
USP54-215ENST00000497106 CCDC74BQ96LY2 380 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 ZNF300Q96RE9 604 aaPredicted RBP7.85□□□□□ -1.15
USP54-215ENST00000497106 TBL1XR1Q9BZK7 514 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 CCDC90BQ9GZT6 254 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 SLC35A3Q9Y2D2 325 aa7.85□□□□□ -1.15
USP54-215ENST00000497106 PGRMC2O15173 223 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 FAM20BO75063 409 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 LDB3O75112 727 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 TNFRSF21O75509 655 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 NUDT14O95848 222 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 CLPTM1O96005 669 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 POU1F1P28069 291 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 FOLR3P41439 243 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 RPS15P62841 145 aaKnown RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 FOXD4Q12950 439 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 RPL13AP3Q6NVV1 102 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 RAB43Q86YS6 212 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MYDGFQ969H8 173 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 TMCO6Q96DC7 493 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 ALPK1Q96QP1 1244 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 EPS8L2Q9H6S3 715 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 SLC52A3Q9NQ40 469 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 SCN8AQ9UQD0 1980 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 TP53I11O14683 189 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 DENRO43583 198 aaKnown RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 CNOT3O75175 753 aaKnown RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 HIST1H2ABP04908 130 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 TRHRP34981 398 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 CASP9P55211 416 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 RPS26P62854 115 aaKnown RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 BNC1Q01954 994 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 C1orf189Q5VU69 101 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 DHRS4L2Q6PKH6 230 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 HIST3H2AQ7L7L0 130 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 C17orf82Q86X59 251 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 IQCF2Q8IXL9 164 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 PRSS58Q8IYP2 241 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 SMYD1Q8NB12 490 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 ZNF563Q8TA94 476 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 GNPDA2Q8TDQ7 276 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 ATOH1Q92858 354 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 HIST1H2ACQ93077 130 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 C11orf24Q96F05 449 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 SLC41A2Q96JW4 573 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 TSC22D3Q99576 134 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 FAM192AQ9GZU8 254 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 ANKRD19PQ9H560 264 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 C2orf42Q9NWW7 574 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MKL2Q9ULH7 1088 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MAU2Q9Y6X3 613 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 TCRBV5S2A0A599 114 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 H3BNX3 289 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 GALR2O43603 387 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 DPM1O60762 260 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 SORBS2O94875 1100 aaKnown RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 H6PDO95479 791 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 IFNGP01579 166 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 CCKBRP32239 447 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 FRKP42685 505 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 SLC6A8P48029 635 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 PHC1P78364 1004 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 PLCXD2Q0VAA5 305 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 BROXQ5VW32 411 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MORN4Q8NDC4 146 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 KLHL6Q8WZ60 621 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 ORAI3Q9BRQ5 295 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 CRB3Q9BUF7 120 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 EDEM2Q9BV94 578 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 SPRTNQ9H040 489 aaPredicted RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 U3KQV3 271 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 HTR3EA5X5Y0 456 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 A8MUA0 341 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 HRO43593 1189 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 ADAP00813 363 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MT-ND1P03886 318 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 CASRP41180 1078 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 DMWDQ09019 674 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MAP4K2Q12851 820 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 NPTX1Q15818 432 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 ARHGAP11BQ3KRB8 267 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 CYP27C1Q4G0S4 372 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 RBM48Q5RL73 367 aaKnown RBP7.84□□□□□ -1.15
USP54-215ENST00000497106 GUSBP11Q6P575 273 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 C16orf87Q6PH81 154 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 SLC38A5Q8WUX1 472 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MAL2Q969L2 176 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 PRRC1Q96M27 445 aa7.84□□□□□ -1.15
USP54-215ENST00000497106 MCHR1Q99705 422 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms