RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ANXA11P50995 505 aaKnown RBP20.15■□□□□ 0.82
C9orf3-222ENST00000496567 PSPHP78330 225 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 MEP1AQ16819 746 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 CRB2Q5IJ48 1285 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 CDC73Q6P1J9 531 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 HACD2Q6Y1H2 254 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 ZNF441Q8N8Z8 693 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 MIPOL1Q8TD10 442 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 SLC9A6Q92581 669 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 JADE3Q92613 823 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 HOXB13Q92826 284 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-222ENST00000496567 AURKBQ96GD4 344 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-222ENST00000496567 C16orf58Q96GQ5 468 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 CNTNAP3BQ96NU0 1288 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 ANKRD27Q96NW4 1050 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 CNTNAP3Q9BZ76 1288 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 CDCP1Q9H5V8 836 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 GIN1Q9NXP7 522 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 GPR83Q9NYM4 423 aa20.15■□□□□ 0.82
C9orf3-222ENST00000496567 GPR55Q9Y2T6 319 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-222ENST00000496567 ERICH4A6NGS2 130 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 FRG2CA6NGY1 282 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 TMEM200CA6NKL6 621 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 DUXAA6NLW8 204 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 ACOX3O15254 700 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 NME6O75414 186 aaPredicted RBP20.14■□□□□ 0.81
C9orf3-222ENST00000496567 DNAJB5O75953 348 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 ALOX5P09917 674 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 CPA2P48052 419 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 PSG6Q00889 435 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 ZSCAN26Q16670 478 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 RUNDC3AQ59EK9 446 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 AGAP7PQ5VUJ5 663 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 RNF130Q86XS8 419 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 TAGAPQ8N103 731 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 OR52N2Q8NGI0 321 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 ADAMTS15Q8TE58 950 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 HSPBAP1Q96EW2 488 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 AGAP4Q96P64 663 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 STACQ99469 402 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 SH3GL1Q99961 368 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 YIPF4Q9BSR8 244 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 YARS2Q9Y2Z4 477 aaKnown RBP20.14■□□□□ 0.81
C9orf3-222ENST00000496567 PCDHGB3Q9Y5G1 929 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 LAMA5O15230 3695 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 MED13Q9UHV7 2174 aa20.14■□□□□ 0.81
C9orf3-222ENST00000496567 WWP2O00308 870 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 EBAG9O00559 213 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 CEACAM4O75871 244 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 UNC5CO95185 931 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 CT45A8P0DMV1 189 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 CT45A9P0DMV2 189 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 MAP3K8P41279 467 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 KHKP50053 298 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 NR0B1P51843 470 aaKnown RBP20.13■□□□□ 0.81
C9orf3-222ENST00000496567 NRG3P56975 720 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 MLF1P58340 268 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 TBR1Q16650 682 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 CT45A2Q5DJT8 189 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 C6orf89Q6UWU4 347 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 SLC44A2Q8IWA5 706 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-222ENST00000496567 SLC15A4Q8N697 577 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 SLC16A11Q8NCK7 471 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 SLC22A8Q8TCC7 542 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 PNPT1Q8TCS8 783 aaKnown RBP20.13■□□□□ 0.81
C9orf3-222ENST00000496567 HOPXQ9BPY8 73 aaPredicted RBP20.13■□□□□ 0.81
C9orf3-222ENST00000496567 NXF5Q9H1B4 397 aaKnown RBP20.13■□□□□ 0.81
C9orf3-222ENST00000496567 PIGUQ9H490 435 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 LIN28AQ9H9Z2 209 aaKnown RBP20.13■□□□□ 0.81
C9orf3-222ENST00000496567 Q9N2J8 555 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 DUSP22Q9NRW4 184 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 ABI3Q9P2A4 366 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 ACACBO00763 2458 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 PTPRQQ9UMZ3 2332 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 CFAP47Q6ZTR5 3102 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 DOCK10Q96BY6 2186 aa20.13■□□□□ 0.81
C9orf3-222ENST00000496567 FXYD1O00168 92 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ITGA10O75578 1167 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 UBOX5O94941 541 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 NKX2-2O95096 273 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 AGR2O95994 175 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ACP2P11117 423 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 SOX11P35716 441 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 CORO7P57737 925 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 RPS26P62854 115 aaKnown RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 FADDQ13158 208 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 CAPRIN1Q14444 709 aaKnown RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 PIGGQ5H8A4 983 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ACER2Q5QJU3 275 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 EXOSC6Q5RKV6 272 aaKnown RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ABHD17BQ5VST6 288 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 B3GNTL1Q67FW5 361 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 FCRLBQ6BAA4 426 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 GPR155Q7Z3F1 870 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 WDR53Q7Z5U6 358 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 FDCSPQ8NFU4 85 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 GPR151Q8TDV0 419 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 CPPED1Q9BRF8 314 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 THUMPD3Q9BV44 507 aaKnown RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 OR51I1Q9H343 314 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms