RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 RPRMLQ8N4K4 120 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 OR5M9Q8NGP3 310 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.4□□□□□ -0.1
HDAC4-213ENST00000496347 AENQ8WTP8 325 aaKnown RBP14.4□□□□□ -0.1
HDAC4-213ENST00000496347 HGDQ93099 445 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 NTNG2Q96CW9 530 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 VSTM2LQ96N03 204 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 SPOCK3Q9BQ16 436 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 OSBPL11Q9BXB4 747 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 TRIM8Q9BZR9 551 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 SLC6A15Q9H2J7 730 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 TAS2R7Q9NYW3 318 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 RNF6Q9Y252 685 aa14.4□□□□□ -0.1
HDAC4-213ENST00000496347 GPR55Q9Y2T6 319 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-213ENST00000496347 OR6C70A6NIJ9 312 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 C19orf84I3L1E1 186 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 TRIM13O60858 407 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 CHEK2O96017 543 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 HPNP05981 417 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 CDK9P50750 372 aaKnown RBP14.39□□□□□ -0.11
HDAC4-213ENST00000496347 NUP107P57740 925 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 BTKQ06187 659 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 IFFO1Q0D2I5 559 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 PMPCAQ10713 525 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 C1orf185Q5T7R7 199 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 FNDC7Q5VTL7 733 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 FAM71E1Q6IPT2 247 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 SLC30A6Q6NXT4 461 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 WDR93Q6P2C0 686 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 NUP54Q7Z3B4 507 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 C10orf107Q8IVU9 208 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 CCDC116Q8IYX3 515 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 BANPQ8N9N5 519 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 SIMC1Q8NDZ2 872 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 LILRB4Q8NHJ6 448 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 CDC26Q8NHZ8 85 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 CAVIN3Q969G5 261 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 DTNBP1Q96EV8 351 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 ZNF764Q96H86 408 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-213ENST00000496347 BBS4Q96RK4 519 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 TREX2Q9BQ50 279 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-213ENST00000496347 TTYH2Q9BSA4 534 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 C12orf65Q9H3J6 166 aaKnown RBP14.39□□□□□ -0.11
HDAC4-213ENST00000496347 TNFRSF12AQ9NP84 129 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 TNFRSF10DQ9UBN6 386 aa14.39□□□□□ -0.11
HDAC4-213ENST00000496347 POLR3HQ9Y535 204 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-213ENST00000496347 PDZD2O15018 2839 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 A0A087WV62 115 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 C15orf38-AP3S2A0A0A6YYH1 394 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 PRAMEF25A6NGN4 478 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 MYO1GB0I1T2 1018 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 SLC28A1O00337 649 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 AZIN1O14977 448 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 SNPHO15079 494 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 RGS14O43566 566 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 ERN1O75460 977 aaKnown RBP14.38□□□□□ -0.11
HDAC4-213ENST00000496347 IFI6P09912 130 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 GLI4P10075 376 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 SSTR2P30874 369 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 CRYZQ08257 329 aaKnown RBP14.38□□□□□ -0.11
HDAC4-213ENST00000496347 NHSL2Q5HYW2 709 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 KANK2Q63ZY3 851 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 TIGD3Q6B0B8 471 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 CLEC6AQ6EIG7 209 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 RTL6Q6ICC9 239 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 NOXRED1Q6NXP6 359 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 SRRM1Q8IYB3 904 aaKnown RBP14.38□□□□□ -0.11
HDAC4-213ENST00000496347 OR2W6PQ8NHA6 318 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 KAT2AQ92830 837 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 SLC35A4Q96G79 324 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 COL21A1Q96P44 957 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 CCT7Q99832 543 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 ROPN1BQ9BZX4 212 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-213ENST00000496347 ENKD1Q9H0I2 346 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 ROPN1Q9HAT0 212 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-213ENST00000496347 C1orf109Q9NX04 203 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 TAS2R9Q9NYW1 312 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 KLRF1Q9NZS2 232 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 CCL27Q9Y4X3 112 aa14.38□□□□□ -0.11
HDAC4-213ENST00000496347 TLDC2A0PJX2 215 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 FAM90A27PA6NNH2 459 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 UGT2B11O75310 529 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 SNRPB2P08579 225 aaKnown RBP14.37□□□□□ -0.11
HDAC4-213ENST00000496347 CT45A8P0DMV1 189 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 CT45A9P0DMV2 189 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 IGFBP2P18065 325 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 PTPN6P29350 595 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 KRT20P35900 424 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 KIR3DL1P43629 444 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 NCBP2P52298 156 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC4-213ENST00000496347 CORO7P57737 925 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 MRPS22P82650 360 aaKnown RBP14.37□□□□□ -0.11
HDAC4-213ENST00000496347 TFF3Q07654 80 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 ZNF155Q12901 538 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-213ENST00000496347 EFR3AQ14156 821 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 CT45A2Q5DJT8 189 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 ANGPTL8Q6UXH0 198 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 PM20D2Q8IYS1 436 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 ULK2Q8IYT8 1036 aa14.37□□□□□ -0.11
HDAC4-213ENST00000496347 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms