RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SCG5P05408 212 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TLX1P31314 330 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 GIPRP48546 466 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 MAN2A2P49641 1150 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 LIMK1P53667 647 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TNFRSF17Q02223 184 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF91Q05481 1191 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 ST3GAL3Q11203 375 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TCEA2Q15560 299 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 ENTPD8Q5MY95 495 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 SLC25A30Q5SVS4 291 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 RNLSQ5VYX0 342 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 RRM2BQ7LG56 351 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 HMGN2P46Q86SG4 172 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 SLC34A3Q8N130 599 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 FAM26EQ8N5C1 309 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TSACCQ96A04 125 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 MS4A4EQ96PG1 132 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 FCRL4Q96PJ5 515 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 SERINC2Q96SA4 455 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 PRRG3Q9BZD7 231 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 QRSL1Q9H0R6 528 aaKnown RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 S1PR5Q9H228 398 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 SLC38A1Q9H2H9 487 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 SYNPO2LQ9H987 977 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 PEX16Q9Y5Y5 336 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 KCNE3Q9Y6H6 103 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 A0A1W2PS29 197 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 AGAP5A6NIR3 686 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 MYL12BO14950 172 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CYP7B1O75881 506 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 MAGP20916 626 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 DRD1P21728 446 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 PRKAR1BP31321 381 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 MRPS21P82921 87 aaKnown RBP10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF45Q02386 682 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CHRNEQ04844 493 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 GINS1Q14691 196 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TRAM2Q15035 370 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 SPHARQ15513 63 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 KIAA1324Q6UXG2 1013 aaKnown RBP10.39□□□□□ -0.75
CMSS1-208ENST00000496116 GDPGP1Q6ZNW5 385 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 PROKR2Q8NFJ6 384 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 OR4K14Q8NGD5 310 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 OR9Q1Q8NGQ5 310 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TEX47Q8TBZ9 253 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 GNPDA2Q8TDQ7 276 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 KAT2AQ92830 837 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 GIMAP5Q96F15 307 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 MRGPRX1Q96LB2 322 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ARHGDIGQ99819 225 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TAPBPLQ9BX59 468 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TMEM168Q9H0V1 697 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ANKRD19PQ9H560 264 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 PRDM9Q9NQV7 894 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CTPS2Q9NRF8 586 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 MYO9BQ13459 2157 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TRBV23OR9-2A0A075B6M9 112 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 IRGMA1A4Y4 181 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ISPDA4D126 451 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 LRRC72A6NJI9 287 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 AP3D1O14617 1153 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 DSCR3O14972 297 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TNFSF14O43557 240 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 B3GALT2O43825 422 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 KIAA0513O60268 411 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CSO75390 466 aaKnown RBP10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ADRA2AP08913 450 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CCNYL3P0C7X3 344 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 PSMA1P25786 263 aaKnown RBP10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CDK5Q00535 292 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 IFITM3Q01628 133 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ADAM15Q13444 863 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 FAM214AQ32MH5 1076 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 PRRT3Q5FWE3 981 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TPRG1LQ5T0D9 272 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CDC73Q6P1J9 531 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 FBXO42Q6P3S6 717 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ZNF730Q6ZMV8 503 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 PLEKHG7Q6ZR37 379 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ABHD13Q7L211 337 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 ATCAYQ86WG3 371 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 VRK2Q86Y07 508 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TRIM48Q8IWZ4 208 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 IQCF1Q8N6M8 205 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CAMKVQ8NCB2 501 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CCL4L1Q8NHW4 92 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 COL26A1Q96A83 441 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TM4SF19Q96DZ7 209 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 LRR1Q96L50 414 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 BMFQ96LC9 184 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 C10orf90Q96M02 699 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 OPALINQ96PE5 141 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 OR2A14Q96R47 310 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 OR2A5Q96R48 311 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 CDADC1Q9BWV3 514 aa10.39□□□□□ -0.75
CMSS1-208ENST00000496116 TRNAU1APQ9NX07 287 aaKnown RBP10.39□□□□□ -0.75
CMSS1-208ENST00000496116 NTMQ9P121 344 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms