RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 ITPAQ9BY32 194 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 NXF5Q9H1B4 397 aaKnown RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 GLIPR2Q9H4G4 154 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ZNF395Q9H8N7 513 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 VIPAS39Q9H9C1 493 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 IL1RL2Q9HB29 575 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ACSS1Q9NUB1 689 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 THAP1Q9NVV9 213 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ASIC5Q9NY37 505 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ATP6V1HQ9UI12 483 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 C19orf53Q9UNZ5 99 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 EIF3LQ9Y262 564 aaKnown RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 DTX4Q9Y2E6 619 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ZNF835Q9Y2P0 537 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 RP1L1Q8IWN7 2480 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PDPK1O15530 556 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 AKAP10O43572 662 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 SLC19A2O60779 497 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PPM1BO75688 479 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 WISP2O76076 250 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 SNX4O95219 450 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 ABCB1P08183 1280 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PRPS1L1P21108 318 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 HPCAL1P37235 193 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 FRKP42685 505 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 CASP6P55212 293 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PER3P56645 1201 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PPIAP62937 165 aaKnown RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 KCNJ2P63252 427 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PLGLB1Q02325 96 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 MLC1Q15049 377 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 CMPK2Q5EBM0 449 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 IL23RQ5VWK5 629 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 TMEM81Q6P7N7 255 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PAOXQ6QHF9 649 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 TMEM64Q6YI46 380 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 Q6ZPB1 254 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 SPPL2CQ8IUH8 684 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 LIX1Q8N485 282 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 OR10G3Q8NGC4 313 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 ZFP28Q8NHY6 868 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 SPPL2AQ8TCT8 520 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 GFM2Q969S9 779 aaKnown RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 ATP6V1G3Q96LB4 118 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 VSTM2LQ96N03 204 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 PRPF18Q99633 342 aaKnown RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 TTTY12Q9BZ98 90 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 TSPAN10Q9H1Z9 355 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 ZDHHC11Q9H8X9 412 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 ATAD3AQ9NVI7 634 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 NOP53Q9NZM5 478 aaKnown RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 SH3BP4Q9P0V3 963 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 ERRFI1Q9UJM3 462 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 CNOT11Q9UKZ1 510 aaKnown RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 BOKQ9UMX3 212 aaPredicted RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 MAPRE3Q9UPY8 281 aa11.37□□□□□ -0.59
MRPL55-233ENST00000495899 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 ASH1LQ9NR48 2969 aaKnown RBP11.37□□□□□ -0.59
MRPL55-233ENST00000495899 UQCRHLA0A096LP55 91 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 TTC36A6NLP5 189 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 SLCO1B7G3V0H7 640 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 UPK1AO00322 258 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 KLF11O14901 512 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 SCAMP2O15127 329 aaKnown RBP11.36□□□□□ -0.59
MRPL55-233ENST00000495899 LRRTM2O43300 516 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 HS6ST1O60243 411 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 SNNO75324 88 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-233ENST00000495899 ERN1O75460 977 aaKnown RBP11.36□□□□□ -0.59
MRPL55-233ENST00000495899 LRATO95237 230 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 PSMG1O95456 288 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 CT45A8P0DMV1 189 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 CT45A9P0DMV2 189 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 PIGAP37287 484 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 RFC3P40938 356 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 MC3RP41968 323 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 DNASE1L1P49184 302 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 MANFP55145 182 aaKnown RBP11.36□□□□□ -0.59
MRPL55-233ENST00000495899 FBXW4P57775 412 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 C21orf58P58505 322 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 PLCXD2Q0VAA5 305 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 SNTA1Q13424 505 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 PDCD2Q16342 344 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-233ENST00000495899 CT45A2Q5DJT8 189 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 MTFR2Q6P444 385 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 ARHGAP11AQ6P4F7 1023 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 TMEM107Q6UX40 140 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 SLC34A3Q8N130 599 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 FAM109AQ8N4B1 249 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 OR5M3Q8NGP4 307 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 CLHC1Q8NHS4 586 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 MGARPQ8TDB4 240 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 DIO2Q92813 273 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 ARL8AQ96BM9 186 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 NTNG2Q96CW9 530 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 COQ8BQ96D53 544 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 MAGED4Q96JG8 741 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 ANGPTL4Q9BY76 406 aa11.36□□□□□ -0.59
MRPL55-233ENST00000495899 MANSC1Q9H8J5 431 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms