RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 Q6ZS92 163 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 CYP4Z2PQ8N1L4 340 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 RBMXL3Q8N7X1 1067 aaKnown RBP15.81■□□□□ 0.12
HDAC6-235ENST00000495515 GOT1L1Q8NHS2 421 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-235ENST00000495515 TSPEARQ8WU66 669 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 SPDL1Q96EA4 605 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 SGCZQ96LD1 299 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 C5orf34Q96MH7 638 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 NXF5Q9H1B4 397 aaKnown RBP15.81■□□□□ 0.12
HDAC6-235ENST00000495515 Q9N2J8 555 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 EQTNQ9NQ60 294 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 ANKRD10Q9NXR5 420 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 ADAM21Q9UKJ8 722 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 VPS4AQ9UN37 437 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 FAF1Q9UNN5 650 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-235ENST00000495515 DTX4Q9Y2E6 619 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 OR10H1Q9Y4A9 318 aa15.81■□□□□ 0.12
HDAC6-235ENST00000495515 IGSF10Q6WRI0 2623 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 RNF103-CHMP3A0A140T963 221 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 TO15178 435 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 ANP32DO95626 131 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 F10P00742 488 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 NAGAP17050 411 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 KRT20P35900 424 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 SOX3P41225 446 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 ZFP36L2P47974 494 aaKnown RBP15.8■□□□□ 0.12
HDAC6-235ENST00000495515 TRPC1P48995 793 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 ZNF169Q14929 603 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-235ENST00000495515 C6orf10Q5SRN2 563 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 FUNDC1Q8IVP5 155 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 PNPLA2Q96AD5 504 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 VPS33AQ96AX1 596 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 SPACA9Q96E40 222 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-235ENST00000495515 LMF2Q9BU23 707 aaKnown RBP15.8■□□□□ 0.12
HDAC6-235ENST00000495515 MFRPQ9BY79 579 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 TIMMDC1Q9NPL8 285 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 SAR1AQ9NR31 198 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 MRTO4Q9UKD2 239 aaKnown RBP15.8■□□□□ 0.12
HDAC6-235ENST00000495515 NPFFR2Q9Y5X5 522 aa15.8■□□□□ 0.12
HDAC6-235ENST00000495515 A0A1W2PP18 115 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 TP53I11O14683 189 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 SLC22A2O15244 555 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 OR6B1O95007 311 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 NADKO95544 446 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 HMGN2P05204 90 aaKnown RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 ALOX5P09917 674 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 FBXO45P0C2W1 286 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 CT45A8P0DMV1 189 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 CT45A9P0DMV2 189 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 CHI3L1P36222 383 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 RPP38P78345 283 aaKnown RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 MRPS22P82650 360 aaKnown RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 PLCXD2Q0VAA5 305 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 LASP1Q14847 261 aaKnown RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 MAPRE2Q15555 327 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 NNATQ16517 81 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 CYP27C1Q4G0S4 372 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 CT45A2Q5DJT8 189 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 ZNF468Q5VIY5 522 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 SLC6A19Q695T7 634 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 MFSD12Q6NUT3 480 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 IL20RBQ6UXL0 311 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 RTL4Q6ZR62 310 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 ZNF621Q6ZSS3 439 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 SLC44A2Q8IWA5 706 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-235ENST00000495515 SLC34A3Q8N130 599 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 GOLM1Q8NBJ4 401 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 TMEM178AQ8NBL3 297 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 CATSPER1Q8NEC5 780 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 OR5AK3PQ8NH89 298 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 SLC9A6Q92581 669 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 JADE3Q92613 823 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 ACTRT3Q9BYD9 372 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 ANAPC2Q9UJX6 822 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 PCDHGB6Q9Y5F9 930 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 PCDHGB3Q9Y5G1 929 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 CAPN7Q9Y6W3 813 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 DOCK10Q96BY6 2186 aa15.79■□□□□ 0.12
HDAC6-235ENST00000495515 BAHCC1Q9P281 2608 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 ANGPT2O15123 496 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 ABCB7O75027 752 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 SLC25A12O75746 678 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 NEURL1O76050 574 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 KRT75O95678 551 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 SNRPB2P08579 225 aaKnown RBP15.78■□□□□ 0.12
HDAC6-235ENST00000495515 ABCD3P28288 659 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 CD97P48960 835 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 ANXA11P50995 505 aaKnown RBP15.78■□□□□ 0.12
HDAC6-235ENST00000495515 PSMD4P55036 377 aaKnown RBP15.78■□□□□ 0.12
HDAC6-235ENST00000495515 CORO7P57737 925 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 PSG6Q00889 435 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 NFATC3Q12968 1075 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 DECR1Q16698 335 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 ZNF766Q5HY98 468 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 SPINK14Q6IE38 97 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 SLC25A25Q6KCM7 469 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 C6orf120Q7Z4R8 191 aa15.78■□□□□ 0.12
HDAC6-235ENST00000495515 PTRH1Q86Y79 214 aaKnown RBP15.78■□□□□ 0.12
HDAC6-235ENST00000495515 MDS2Q8NDY4 140 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms