RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 QRFPRQ96P65 431 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 GSTK1Q9Y2Q3 226 aa12.69□□□□□ -0.38
GPC1-209ENST00000495100 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 METTL15A6NJ78 407 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 KIAA0355O15063 1070 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 CSO75390 466 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 RPP14O95059 124 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 ALPPP05187 535 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 ADRA2AP08913 450 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 INHBBP09529 407 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 ELAVL4P26378 380 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 RPL3P39023 403 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 ETV5P41161 510 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 ETV1P50549 477 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 SELENBP1Q13228 472 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 GPM6BQ13491 265 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 GGTA1PQ4G0N0 100 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 OR4C11Q6IEV9 310 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 FAM111BQ6SJ93 734 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 ZER1Q7Z7L7 766 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 TRMT61AQ96FX7 289 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 CD93Q9NPY3 652 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 SVILO95425 2214 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 LOC102723532A0A0G2JNH3 316 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 C1orf226A1L170 272 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 HMGN4O00479 90 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 HAT1O14929 419 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 HPGDSO60760 199 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 ARAFP10398 606 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 OSMP13725 252 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 CSNK2A2P19784 350 aaPredicted RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 TGFBR2P37173 567 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 MRPL28Q13084 256 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 TSEN54Q7Z6J9 526 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 OR52E1Q8NGJ3 308 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 ZNF671Q8TAW3 534 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 MRGPRX3Q96LB0 322 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 LYSMD1Q96S90 227 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 GPR55Q9Y2T6 319 aaPredicted RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 WDR45Q9Y484 360 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 EDDM13A0A1B0GTR0 161 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 POM121BA6NF01 834 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 ANKRD61A6NGH8 418 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 SOCS6O14544 535 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 RAD1O60671 282 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 SLC2A2P11168 524 aaPredicted RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 BMPR1AP36894 532 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 GCGRP47871 477 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 GIPRP48546 466 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 FADDQ13158 208 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 SDE2Q6IQ49 451 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 DHRS4L2Q6PKH6 230 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 RPTNQ6XPR3 784 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 PDZD3Q86UT5 571 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 BEST4Q8NFU0 473 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 OR5T3Q8NGG3 340 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 OR52P1PQ8NH57 321 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 CDS1Q92903 461 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 NKX3-1Q99801 234 aaPredicted RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 MAPKAP1Q9BPZ7 522 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 TMEM246Q9BRR3 403 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 RANGRFQ9HD47 186 aaPredicted RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 ATP13A2Q9NQ11 1180 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 RPRD1BQ9NQG5 326 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 NDRG2Q9UN36 371 aaKnown RBP12.68□□□□□ -0.38
GPC1-209ENST00000495100 ZNF232Q9UNY5 417 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 HEATR5BQ9P2D3 2071 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 SCN8AQ9UQD0 1980 aa12.68□□□□□ -0.38
GPC1-209ENST00000495100 TRAV27A0A087WT01 109 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 MAGEA2P43356 314 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 TFF2Q03403 129 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 QPRTQ15274 297 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 ZNF557Q8N988 423 aaPredicted RBP12.67□□□□□ -0.38
GPC1-209ENST00000495100 FAM98AQ8NCA5 519 aaKnown RBP12.67□□□□□ -0.38
GPC1-209ENST00000495100 FCGR1BQ92637 280 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 MKRN2Q9H000 416 aaKnown RBP12.67□□□□□ -0.38
GPC1-209ENST00000495100 SAP130Q9H0E3 1048 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 DDX31Q9H8H2 851 aaKnown RBP12.67□□□□□ -0.38
GPC1-209ENST00000495100 BRF2Q9HAW0 419 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 CACNB4O00305 520 aaPredicted RBP12.67□□□□□ -0.38
GPC1-209ENST00000495100 DVL2O14641 736 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 PAHP00439 452 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 SFSWAPQ12872 951 aaKnown RBP12.67□□□□□ -0.38
GPC1-209ENST00000495100 PNCKQ6P2M8 343 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 PRICKLE2Q7Z3G6 844 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 TBC1D19Q8N5T2 526 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 NEIL3Q8TAT5 605 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 TMEM255BQ8WV15 326 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 OR5P2Q8WZ92 322 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 KCTD7Q96MP8 289 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 GPA33Q99795 319 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 CHIAQ9BZP6 476 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 PCDHGA3Q9Y5H0 932 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 LRRN3E7EW58 273 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 SLITRK5O94991 958 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 LATS1O95835 1130 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 MPIP34949 423 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 XCR1P46094 333 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms