RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 TBX6O95947 436 aaPredicted RBP12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 C8GP07360 202 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 BMP4P12644 408 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 ALOX15P16050 662 aaPredicted RBP12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 PTMSP20962 102 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 SSTR4P31391 388 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 HADHBP55084 474 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 NNATQ16517 81 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 PCID2Q5JVF3 399 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 SFRP5Q5T4F7 317 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 DEPDC1Q5TB30 811 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 OR5M10Q6IEU7 315 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 SLC22A25Q6T423 547 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 GLCCI1Q86VQ1 547 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 KCNJ9Q92806 393 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 KISS1RQ969F8 398 aaPredicted RBP12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 RADILQ96JH8 1075 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 SLC6A7Q99884 636 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 PRRG4Q9BZD6 226 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 MMP27Q9H306 513 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 CDC42EP4Q9H3Q1 356 aaKnown RBP12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 DHRS7Q9Y394 339 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 PMF1-BGLAPU3KQ54 211 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 SPACA6W5XKT8 324 aa12.85□□□□□ -0.35
CHMP2B-205ENST00000494980 SHOX2O60902 331 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 MFAP3LO75121 409 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 CHRNB3Q05901 458 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 SP140Q13342 867 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 STK11Q15831 433 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 SGCBQ16585 318 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 ADPRMQ3LIE5 342 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 VAX1Q5SQQ9 334 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 RAET1LQ5VY80 246 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 UGT3A1Q6NUS8 523 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 CES3Q6UWW8 571 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 CENPUQ71F23 418 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 CNGA4Q8IV77 575 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 PALM2Q8IXS6 379 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 ST13P4Q8IZP2 240 aaPredicted RBP12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 BBOF1Q8ND07 529 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 KRT35Q92764 455 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 RIT1Q92963 219 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 ADIPOR1Q96A54 375 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 SLITRK2Q9H156 845 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 EHD3Q9NZN3 535 aa12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 MRPS18CQ9Y3D5 142 aaKnown RBP12.84□□□□□ -0.35
CHMP2B-205ENST00000494980 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 NPIPA5A0A0B4J1W7 369 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 CCT8L1PA6NM43 557 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 B4DXG7 233 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 NPIPA7E9PJI5 369 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 H3BML4 177 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 LILRA1O75019 489 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 NTN1O95631 604 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 AIFM1O95831 613 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 NUDT17P0C025 328 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 HIST1H2AGP0C0S8 130 aaPredicted RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 NPIPA8P0DM63 369 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 HIST1H2ADP20671 130 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 OGNP20774 298 aaKnown RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 CPN2P22792 545 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 SESN2P58004 480 aaPredicted RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 RPS3AP61247 264 aaKnown RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 KLF1Q13351 362 aaPredicted RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 CCNIQ14094 377 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 PPA1Q15181 289 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 Q6ZSR9 355 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 METTL25Q8N6Q8 603 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 TTLQ8NG68 377 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 HIST1H2AHQ96KK5 128 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 CHP1Q99653 195 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 HIST1H2AJQ99878 128 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 H2AFJQ9BTM1 129 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 MYOZ1Q9NP98 299 aaPredicted RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 PRDM7Q9NQW5 492 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 DDX28Q9NUL7 540 aaKnown RBP12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 PPIAL4AQ9Y536 164 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 DNAH3Q8TD57 4116 aa12.83□□□□□ -0.36
CHMP2B-205ENST00000494980 POM121CA8CG34 1229 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 UGT2B11O75310 529 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 TACSTD2P09758 323 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 TPSB2P20231 275 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 MGAT1P26572 445 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 AGTR1P30556 359 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 COPS2P61201 443 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 HMGCS1Q01581 520 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 TPSAB1Q15661 275 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 ADNP2Q6IQ32 1131 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 ZNF544Q6NX49 715 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 ZNF549Q6P9A3 640 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 NUP54Q7Z3B4 507 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 VSTM4Q8IW00 320 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 OR5M1Q8NGP8 315 aa12.82□□□□□ -0.36
CHMP2B-205ENST00000494980 EEF1AKMT1Q8WVE0 214 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms