RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SNPHO15079 494 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 ICOSLGO75144 302 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 SNX4O95219 450 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 SHBGP04278 402 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 CT45A8P0DMV1 189 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 CT45A9P0DMV2 189 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 HSD3B1P14060 373 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 CAPN3P20807 821 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 IMPDH1P20839 514 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 BMP5P22003 454 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 ATP5F1P24539 256 aaPredicted RBP10.61□□□□□ -0.71
VTI1A-208ENST00000494728 HSD3B2P26439 372 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 HMOX2P30519 316 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 TIA1P31483 386 aaKnown RBP eCLIP10.61□□□□□ -0.71
VTI1A-208ENST00000494728 DEKP35659 375 aaKnown RBP10.61□□□□□ -0.71
VTI1A-208ENST00000494728 AGFG1P52594 562 aaKnown RBP10.61□□□□□ -0.71
VTI1A-208ENST00000494728 LCP2Q13094 533 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 CT45A2Q5DJT8 189 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 NHSL2Q5HYW2 709 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 TMEM81Q6P7N7 255 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 SH2D5Q6ZV89 423 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 PACS2Q86VP3 889 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 CCDC116Q8IYX3 515 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 OR7G2Q8NG99 324 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 METTL6Q8TCB7 284 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 ZNF675Q8TD23 568 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 C16orf78Q8WTQ4 265 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 TMBIM1Q969X1 311 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 MTBPQ96DY7 904 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 WDYHV1Q96HA8 205 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 VSTM2LQ96N03 204 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 BTBD9Q96Q07 612 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 G6PC3Q9BUM1 346 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 LIME1Q9H400 295 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 CRIM1Q9NZV1 1036 aa10.61□□□□□ -0.71
VTI1A-208ENST00000494728 PSMC3IPQ9P2W1 217 aaPredicted RBP10.61□□□□□ -0.71
VTI1A-208ENST00000494728 EXO1Q9UQ84 846 aaKnown RBP10.61□□□□□ -0.71
VTI1A-208ENST00000494728 GPR55Q9Y2T6 319 aaPredicted RBP10.61□□□□□ -0.71
VTI1A-208ENST00000494728 GNG14A0A1W2PPG7 69 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 PRAMEF25A6NGN4 478 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 FRG2CA6NGY1 282 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 TO15178 435 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 ACOX3O15254 700 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 GUCY1B2O75343 617 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 ESRRBO95718 433 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 EPPINO95925 133 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 KRT6AP02538 564 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 KRT6BP04259 564 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 TAC1P20366 129 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 DNAJA1P31689 397 aaKnown RBP10.6□□□□□ -0.71
VTI1A-208ENST00000494728 PPICP45877 212 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 KRT6CP48668 564 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 TRA2BP62995 288 aaKnown RBP10.6□□□□□ -0.71
VTI1A-208ENST00000494728 BTKQ06187 659 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 TOMM20Q15388 145 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 CEBPEQ15744 281 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 NSUN5P2Q63ZY6 315 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 ARSKQ6UWY0 536 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 SPNS3Q6ZMD2 512 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 TRMT10CQ7L0Y3 403 aaKnown RBP10.6□□□□□ -0.71
VTI1A-208ENST00000494728 LACC1Q8IV20 430 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 CLYBLQ8N0X4 340 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 C9orf106Q8NAJ2 232 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 OR4N2Q8NGD1 307 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 OR1J4Q8NGS1 313 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 RDH11Q8TC12 318 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 RNF138Q8WVD3 245 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 HSPBAP1Q96EW2 488 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 TRIB1Q96RU8 372 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 GPATCH1Q9BRR8 931 aaKnown RBP10.6□□□□□ -0.71
VTI1A-208ENST00000494728 FAIM2Q9BWQ8 316 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 FOLH1BQ9HBA9 442 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 RYDENQ9NUL5 291 aaKnown RBP10.6□□□□□ -0.71
VTI1A-208ENST00000494728 KLRF1Q9NZS2 232 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 FLRT3Q9NZU0 649 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 FBXL2Q9UKC9 423 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 PTGDR2Q9Y5Y4 395 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 ZNF780BQ9Y6R6 833 aa10.6□□□□□ -0.71
VTI1A-208ENST00000494728 ROS1P08922 2347 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 TLN2Q9Y4G6 2542 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 NUP214P35658 2090 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 PRR14LQ5THK1 2151 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 MBD3L4A6NDZ8 208 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 MBD3L3A6NE82 208 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 MBD3L5A6NJ08 208 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 TSPAN2O60636 221 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 ULK1O75385 1050 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 CTAG2O75638 210 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 ZWINTO95229 277 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 PROCP04070 461 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 NAGAP17050 411 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 KRT15P19012 456 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 DRD5P21918 477 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 TCEA1P23193 301 aaKnown RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 UQCRC1P31930 480 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 ASCL1P50553 236 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 GAS1P54826 345 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 ACSM2AQ08AH3 577 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 FOXF2Q12947 444 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 SPIN4Q56A73 249 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms