RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 METTL2AQ96IZ6 378 aaKnown RBP30.42■■■□□ 2.46
CBX4-203ENST00000494546 ACKR4Q9NPB9 350 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 CACNA1DQ01668 2161 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 TRAPPC6AO75865 159 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 LINC00032P0C843 101 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 NTSP30990 170 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 PMPCAQ10713 525 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 ARL13AQ5H913 290 aaPredicted RBP30.41■■■□□ 2.46
CBX4-203ENST00000494546 Q6ZSR9 355 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 ZCCHC23Q6ZST2 131 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 IKBIPQ70UQ0 350 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 TMBIM1Q969X1 311 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 EGLN2Q96KS0 407 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 GNRHR2Q96P88 292 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 BTBD9Q96Q07 612 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 NODALQ96S42 347 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 TUBB1Q9H4B7 451 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 FOLH1BQ9HBA9 442 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 ALKBH4Q9NXW9 302 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 TAS2R7Q9NYW3 318 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 EXO1Q9UQ84 846 aaKnown RBP30.41■■■□□ 2.46
CBX4-203ENST00000494546 DNAJC15Q9Y5T4 150 aa30.41■■■□□ 2.46
CBX4-203ENST00000494546 TMEM233B4DJY2 109 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 GNB5O14775 395 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 TO15178 435 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 PLOD3O60568 738 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 UGT2B11O75310 529 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 NEFHP12036 1026 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 TACR1P25103 407 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 CORO7P57737 925 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 NUP107P57740 925 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 KRT71Q3SY84 523 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 FNDC7Q5VTL7 733 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 DDIASQ8IXT1 998 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 NEIL3Q8TAT5 605 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 GFM2Q969S9 779 aaKnown RBP30.4■■■□□ 2.46
CBX4-203ENST00000494546 TMEM41AQ96HV5 264 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 VSTM2LQ96N03 204 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 TMEM109Q9BVC6 243 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 RUBCNLQ9H714 662 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 EML4Q9HC35 981 aaKnown RBP30.4■■■□□ 2.46
CBX4-203ENST00000494546 C15orf41Q9Y2V0 281 aa30.4■■■□□ 2.46
CBX4-203ENST00000494546 NCKAP5O14513 1909 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 CRYBG3Q68DQ2 2970 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 ESPNB1AK53 854 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 NPIPB8E9PQR5 432 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 C19orf84I3L1E1 186 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 ERN1O75460 977 aaKnown RBP30.39■■■□□ 2.46
CBX4-203ENST00000494546 REM1O75628 298 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 COX6B1P14854 86 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 RNF165Q6ZSG1 346 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 ACAD11Q709F0 780 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 AGR3Q8TD06 166 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 STMN4Q9H169 189 aaPredicted RBP30.39■■■□□ 2.46
CBX4-203ENST00000494546 TAS2R9Q9NYW1 312 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 KLRF1Q9NZS2 232 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 RNF6Q9Y252 685 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 TRAF6Q9Y4K3 522 aa30.39■■■□□ 2.46
CBX4-203ENST00000494546 EXPH5Q8NEV8 1989 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 CT45A8P0DMV1 189 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 CT45A9P0DMV2 189 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 MC3RP41968 323 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 RPL38P63173 70 aaKnown RBP30.38■■■□□ 2.45
CBX4-203ENST00000494546 TOMM20Q15388 145 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 CT45A2Q5DJT8 189 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 TMEM107Q6UX40 140 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 ANGPTL8Q6UXH0 198 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 NPSR1Q6W5P4 371 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 CLYBLQ8N0X4 340 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 TWIST2Q8WVJ9 160 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 ASB5Q8WWX0 329 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 COL21A1Q96P44 957 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 OSBPL11Q9BXB4 747 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 GLIPR2Q9H4G4 154 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 GALNT9Q9HCQ5 603 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 CELSR2Q9HCU4 2923 aa30.38■■■□□ 2.45
CBX4-203ENST00000494546 C15orf38-AP3S2A0A0A6YYH1 394 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 C2orf72A6NCS6 295 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 FGF4P08620 206 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 PRF1P14222 555 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 ZNF155Q12901 538 aaPredicted RBP30.37■■■□□ 2.45
CBX4-203ENST00000494546 GALNTL6Q49A17 601 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 SH2D4BQ5SQS7 431 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 TIGD3Q6B0B8 471 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 SLC30A6Q6NXT4 461 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 B3GNT6Q6ZMB0 384 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 CCDC71Q8IV32 467 aaPredicted RBP30.37■■■□□ 2.45
CBX4-203ENST00000494546 MCEMP1Q8IX19 187 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 OR10Q1Q8NGQ4 319 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 FAM215AQ9Y5M1 114 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 NOTCH2Q04721 2471 aa30.37■■■□□ 2.45
CBX4-203ENST00000494546 WDR1O75083 606 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 ICOSLGO75144 302 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 COQ9O75208 318 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 KRT20P35900 424 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 CDK9P50750 372 aaKnown RBP30.36■■■□□ 2.45
CBX4-203ENST00000494546 ZNF844Q08AG5 666 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 RFTN2Q52LD8 501 aaPredicted RBP30.36■■■□□ 2.45
CBX4-203ENST00000494546 RTL6Q6ICC9 239 aa30.36■■■□□ 2.45
CBX4-203ENST00000494546 ANKRD26P1Q6NSI1 321 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms