RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CALML5Q9NZT1 146 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 CDC14AQ9UNH5 594 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 DOLKQ9UPQ8 538 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 LIPT1Q9Y234 373 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 SLC9A8Q9Y2E8 581 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 CHST2Q9Y4C5 530 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 PCDH15Q96QU1 1955 aa9.97□□□□□ -0.81
CLCN6-208ENST00000494028 A0A087WV62 115 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 CENPVL1A0A0U1RR11 272 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ENO4A6NNW6 628 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ZAR1LA6NP61 321 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 TGFBR3LH3BV60 316 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 M0R129 80 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 FOXS1O43638 330 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 KIAA0513O60268 411 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 FAM20BO75063 409 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 SEC14L2O76054 403 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 GPR75O95800 540 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 AGR2O95994 175 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 MT-ND2P03891 347 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 CT62P0C5K7 136 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 GABRB1P18505 474 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 NT5EP21589 574 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 PCMT1P22061 227 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 RPS4Y1P22090 263 aaKnown RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 PRKAR1BP31321 381 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 EPHA4P54764 986 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 UGT2B15P54855 530 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 MGAT2Q10469 447 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 DUSP8Q13202 625 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 SMN1Q16637 294 aaKnown RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 PRICKLE4Q2TBC4 344 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 PROX2Q3B8N5 592 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 INAVAQ3KP66 663 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ATAD3BQ5T9A4 648 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 OGFOD3Q6PK18 319 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 VRK2Q86Y07 508 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 CCDC103Q8IW40 242 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 SLC16A11Q8NCK7 471 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF420Q8TAQ5 688 aaPredicted RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ADAMTS15Q8TE58 950 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 DNASE2BQ8WZ79 361 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 COL26A1Q96A83 441 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ANKRD9Q96BM1 317 aaPredicted RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 SLC35A4Q96G79 324 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 MPP4Q96JB8 637 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 CNDP2Q96KP4 475 aaKnown RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 SLC38A3Q99624 504 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 DOK1Q99704 481 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF350Q9GZX5 532 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 NAA50Q9GZZ1 169 aaKnown RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 DUSP21Q9H596 190 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF556Q9HAH1 456 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 CXorf21Q9HAI6 301 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ADAP2Q9NPF8 381 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 TMEM9Q9P0T7 183 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 HCN3Q9P1Z3 774 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ENOPH1Q9UHY7 261 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 C19orf53Q9UNZ5 99 aaPredicted RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF443Q9Y2A4 671 aaPredicted RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 GPR55Q9Y2T6 319 aaPredicted RBP9.96□□□□□ -0.82
CLCN6-208ENST00000494028 SNX5Q9Y5X3 404 aa9.96□□□□□ -0.82
CLCN6-208ENST00000494028 FER1L5A0AVI2 2057 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 A0A0A6YYC8 382 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 A0A1W2PRQ8 180 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 SH3PXD2BA1X283 911 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 I3L1I5 382 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 CHST10O43529 356 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 HRO43593 1189 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 PLOD3O60568 738 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 CBX7O95931 251 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 DCNP07585 359 aaKnown RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 CHMP24386 653 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 FNTBP49356 437 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 MAPK10P53779 464 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 GP2P55259 537 aaKnown RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 SH3BGRP55822 239 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 SMIM11AP58511 58 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF155Q12901 538 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 DGCR6Q14129 220 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 ARHGAP11BQ3KRB8 267 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 TRMT12Q53H54 448 aaKnown RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 DCST1Q5T197 706 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 CWF19L1Q69YN2 538 aaKnown RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 TYW3Q6IPR3 259 aaKnown RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF836Q6ZNA1 936 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 NLGN4XQ8N0W4 816 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 SDR16C5Q8N3Y7 309 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 MORN4Q8NDC4 146 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 ADAMTS18Q8TE60 1221 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 DOK4Q8TEW6 326 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 FAR1Q8WVX9 515 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 SLC9A6Q92581 669 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 DIO2Q92813 273 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 HOXB13Q92826 284 aaPredicted RBP9.95□□□□□ -0.82
CLCN6-208ENST00000494028 TANKQ92844 425 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 UBE2FQ969M7 185 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 C12orf43Q96C57 262 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms