RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FER1L6-AS2Q96M78 137 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 OR2A5Q96R48 311 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 GPR21Q99679 349 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 BARD1Q99728 777 aaKnown RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 TM9SF2Q99805 663 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 KCTD14Q9BQ13 255 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 WDR83Q9BRX9 315 aaKnown RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 NAT9Q9BTE0 207 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 CCDC32Q9BV29 185 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 NAA50Q9GZZ1 169 aaKnown RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 LHPPQ9H008 270 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 SEMA6AQ9H2E6 1030 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 DSN1Q9H410 356 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 NIPAL2Q9H841 368 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 WDR54Q9H977 334 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF556Q9HAH1 456 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 FARSBQ9NSD9 589 aaKnown RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 IARS2Q9NSE4 1012 aaKnown RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 ACOXLQ9NUZ1 547 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 PNPOQ9NVS9 261 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 PLA2G3Q9NZ20 509 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 C5AR2Q9P296 337 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 KIF17Q9P2E2 1029 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 PLEKHB1Q9UF11 243 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 TAC3Q9UHF0 121 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 TRMT6Q9UJA5 497 aaKnown RBP7.67□□□□□ -1.18
HDAC6-234ENST00000493923 FBXO5Q9UKT4 447 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 AP3M1Q9Y2T2 418 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 KCNE2Q9Y6J6 123 aa7.67□□□□□ -1.18
HDAC6-234ENST00000493923 A0A0A6YYC8 382 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 PABPN1LA6NDY0 278 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 C12orf71A8MTZ7 269 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 I3L1I5 382 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 hCG_2039718K7EN88 272 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 NDUFA2O43678 99 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 TRIM13O60858 407 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 DNAJB6O75190 326 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 LYPLA1O75608 230 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 B3GALNT1O75752 331 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 PRKD3O94806 890 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 SEC24DO94855 1032 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 WDPCPO95876 746 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 F10P00742 488 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 LDLRP01130 860 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ZGLP1P0C6A0 271 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 COX6A1P12074 109 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ITGA2P17301 1181 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IMPA1P29218 277 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 SLC26A3P40879 764 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 HTR3AP46098 478 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 RPL14P50914 215 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ATP4BP51164 291 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 RAB25P57735 213 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IFITM3Q01628 133 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 EEF1A2Q05639 463 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 FADDQ13158 208 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IKZF1Q13422 519 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 RBBP7Q16576 425 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 TCTE1Q5JU00 501 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ATG9BQ674R7 924 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 XAF1Q6GPH4 301 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 LCN8Q6JVE9 175 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 LRRC8EQ6NSJ5 796 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IGFL2Q6UWQ7 119 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 LINC00696Q6ZRV3 163 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 VN1R4Q7Z5H5 301 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 NOXA1Q86UR1 476 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 C8orf59Q8N0T1 100 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IL17RDQ8NFM7 739 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 BPIFB6Q8NFQ5 453 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 PSMA8Q8TAA3 256 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ZFAND1Q8TCF1 268 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 SSC4DQ8WTU2 575 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ASB11Q8WXH4 323 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 SMPDL3AQ92484 453 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 HTRA1Q92743 480 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 AURKBQ96GD4 344 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 THOC3Q96J01 351 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 UBXN10Q96LJ8 280 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 TSNARE1Q96NA8 513 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IP6K3Q96PC2 410 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 HOPXQ9BPY8 73 aaPredicted RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ZFYVE21Q9BQ24 234 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 AARSD1Q9BTE6 412 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 CRB3Q9BUF7 120 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 BDH2Q9BUT1 245 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 RAB11FIP5Q9BXF6 653 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 C20orf27Q9GZN8 174 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 OR51B5Q9H339 312 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF160Q9HCG1 818 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 MRPS30Q9NP92 439 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 CCNB1IP1Q9NPC3 277 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 INTS7Q9NVH2 962 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 CCDC59Q9P031 241 aaKnown RBP7.66□□□□□ -1.18
HDAC6-234ENST00000493923 C3orf18Q9UK00 162 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 IKZF3Q9UKT9 509 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 DHRS7Q9Y394 339 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 NAALAD2Q9Y3Q0 740 aa7.66□□□□□ -1.18
HDAC6-234ENST00000493923 APCP25054 2843 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms