RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 UHMK1Q8TAS1 419 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 SELENOMQ8WWX9 145 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 ISL2Q96A47 359 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 KLHL29Q96CT2 875 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 MBD6Q96DN6 1003 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 NODALQ96S42 347 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 HBEGFQ99075 208 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 MRPL57Q9BQC6 102 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 TUBA1CQ9BQE3 449 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 BRF2Q9HAW0 419 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 SERHLQ9NQF3 203 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 JKAMPQ9P055 326 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 ZNF639Q9UID6 485 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 PSME2Q9UL46 239 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 EXO1Q9UQ84 846 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 PLLPQ9Y342 182 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 ZNF780BQ9Y6R6 833 aa9.35□□□□□ -0.91
NUDCD3-210ENST00000493613 PRAMEF25A6NGN4 478 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 CLCA1A8K7I4 914 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 TRIM49D1C9J1S8 452 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 H0Y3Z8 333 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 ZNF500O60304 480 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 UGT2B11O75310 529 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 ATE1O95260 518 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 CBX7O95931 251 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 IL18BPO95998 194 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 RPS17P08708 135 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 COL6A2P12110 1019 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 FOSL1P15407 271 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 DRD5P21918 477 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 PTGDSP41222 190 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 PPICP45877 212 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 EMDP50402 254 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 DCAF7P61962 342 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 MRPS35P82673 323 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 SRYQ05066 204 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 DUSP2Q05923 314 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 FOXF2Q12947 444 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 LTB4RQ15722 352 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 TRMT12Q53H54 448 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 ENPP6Q6UWR7 440 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 LUZP2Q86TE4 346 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 IFNEQ86WN2 208 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 TRIM42Q8IWZ5 723 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 C1orf52Q8N6N3 182 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 WDSUB1Q8N9V3 476 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 OR52R1Q8NGF1 315 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 RDH11Q8TC12 318 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 ZNF483Q8TF39 744 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 TM4SF18Q96CE8 201 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 CTHRC1Q96CG8 243 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 C16orf45Q96MC5 204 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 ZFP3Q96NJ6 502 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 FMO2Q99518 471 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 TM9SF2Q99805 663 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 YIPF4Q9BSR8 244 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 FAIM2Q9BWQ8 316 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 RBM24Q9BX46 236 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 FUT8Q9BYC5 575 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 TSPYL1Q9H0U9 437 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 MRPL46Q9H2W6 279 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 NMRK1Q9NWW6 199 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 GALNT8Q9NY28 637 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 PRODH2Q9UF12 536 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 DMGDHQ9UI17 866 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 SNX6Q9UNH7 406 aa9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 RAI1Q7Z5J4 1906 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-210ENST00000493613 FRG2CA6NGY1 282 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 OR6C70A6NIJ9 312 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 A8MT66 165 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 OR4F21O95013 312 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 RCBTB2O95199 551 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 GOSR1O95249 250 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 ESRRBO95718 433 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 PCSK2P16519 638 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 HOXB4P17483 251 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 CPA2P48052 419 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 GFRA1P56159 465 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 POU4F3Q15319 338 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 WHAMMP3Q1A5X7 153 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 TCHHL1Q5QJ38 904 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 PLXDC2Q6UX71 529 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 GCNT2Q8N0V5 402 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 CDYL2Q8N8U2 506 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 NOA1Q8NC60 698 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 DCAKDQ8WVC6 231 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 TMBIM1Q969X1 311 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 INTS12Q96CB8 462 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 TMCO6Q96DC7 493 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 CNRIP1Q96F85 164 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 ZNF681Q96N22 645 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 COL21A1Q96P44 957 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 SFXN3Q9BWM7 321 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 OR2B2Q9GZK3 357 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 ACBD3Q9H3P7 528 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 GSX1Q9H4S2 264 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 PLEKHF2Q9H8W4 249 aa9.33□□□□□ -0.92
NUDCD3-210ENST00000493613 PFDN4Q9NQP4 134 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms