RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 MAT2AP31153 395 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 AKR1C3P42330 323 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 CLCN3P51790 818 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 SOX10P56693 466 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 AP3S2P59780 193 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 MRPS10P82664 201 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 SLC25A11Q02978 314 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 ELAVL2Q12926 359 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 MAD2L1Q13257 205 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 OLIG2Q13516 323 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 HTR4Q13639 388 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 COL13A1Q5TAT6 717 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 KDM4DQ6B0I6 523 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 QSOX2Q6ZRP7 698 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 LARP4Q71RC2 724 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 TMUB2Q71RG4 321 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 PID1Q7Z2X4 250 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 LHFPL3Q86UP9 236 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 FJX1Q86VR8 437 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 C16orf78Q8WTQ4 265 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 CCDC107Q8WV48 283 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 PHYHIPQ92561 330 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 GTPBP3Q969Y2 492 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 RELTQ969Z4 430 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 FAM120BQ96EK7 910 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 RNFT2Q96EX2 444 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 FN3KQ9H479 309 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 GDE1Q9NZC3 331 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF69Q9UC07 566 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 LHX6Q9UPM6 363 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 DOCK4Q8N1I0 1966 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 I6L893 689 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 AP4M1O00189 453 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 SEC22BO75396 215 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 YIF1AO95070 293 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 VNN2O95498 520 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 IFNA10P01566 189 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 CLTBP09497 229 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 PEPDP12955 493 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 GGT1P19440 569 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 SLC6A4P31645 630 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 PURAQ00577 322 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 OC90Q02509 493 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 CACNB2Q08289 660 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 FAM102AQ5T9C2 384 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 OR2T5Q6IEZ7 315 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 CDPF1Q6NVV7 123 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 DDX53Q86TM3 631 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 MON1AQ86VX9 555 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 TOMM5Q8N4H5 51 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 NAXEQ8NCW5 288 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 DNAAF1Q8NEP3 725 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 CHST13Q8NET6 341 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 OR2T29Q8NH02 315 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 C22orf15Q8WYQ4 148 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 MARS2Q96GW9 593 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 ADPGKQ9BRR6 497 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 SPATC1LQ9H0A9 340 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM231Q9H6L2 316 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 GBA2Q9HCG7 927 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 LHX9Q9NQ69 397 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 GAR1Q9NY12 217 aaKnown RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 KLHL8Q9P2G9 620 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-205ENST00000493587 DENND4CQ5VZ89 1909 aa6.5□□□□□ -1.37
VPS13B-205ENST00000493587 FAM95CA0A1B0GW59 222 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM218A2RU14 115 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 C9orf170A2RU37 121 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 HNRNPDLO14979 420 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 CPT2P23786 658 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PSMB4P28070 264 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 NDUFA6P56556 154 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 EMX2Q04743 252 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 RBBP4Q09028 425 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 AMHR2Q16671 573 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PYY3Q5JQD4 70 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SDHAF4Q5VUM1 108 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 STEAP4Q687X5 459 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 DHRS7BQ6IAN0 325 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 OR6B2Q6IFH4 312 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 CLEC14AQ86T13 490 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 OR5M9Q8NGP3 310 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ULK4Q96C45 1275 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF845Q96IR2 970 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ASB16Q96NS5 453 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SMAD5Q99717 465 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 FUZQ9BT04 418 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ALG8Q9BVK2 526 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 NFKBIZQ9BYH8 718 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 C2orf42Q9NWW7 574 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 OR12D3Q9UGF7 316 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PCDHB8Q9UN66 801 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ERVW-1Q9UQF0 538 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 NUBP2Q9Y5Y2 271 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 A8MT66 165 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 HSBP1L1C9JCN9 74 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 GFRA2O00451 464 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 CXCL11O14625 94 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 AZIN1O14977 448 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PNPP00491 289 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms