RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 NGFP01138 241 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 RAF1P04049 648 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PYGLP06737 847 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 GNSP15586 552 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 FERP16591 822 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 HNRNPA2B1P22626 353 aaKnown RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 IL4RP24394 825 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NFKBIAP25963 317 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PBLDP30039 288 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 OXTRP30559 389 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CEACAM8P31997 349 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MMP12P39900 470 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PPP1R2P41236 205 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 GNPDA1P46926 289 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MMP15P51511 669 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PLK1P53350 603 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CDH6P55285 790 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CD81P60033 236 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CCL7P80098 99 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MRPS34P82930 218 aaKnown RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NIPAL4Q0D2K0 466 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 KLHL30Q0D2K2 578 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 DPYSQ14117 519 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 DPYSL3Q14195 570 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ESPL1Q14674 2120 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MESDQ14696 234 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 C16orf72Q14CZ0 275 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 BRMS1LQ5PSV4 323 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NCBP2-AS2Q69YL0 99 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ACAD10Q6JQN1 1059 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MZT2BQ6NZ67 158 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CFAP161Q6P656 301 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 DCUN1D2Q6PH85 259 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MYO7BQ6PIF6 2116 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ENPP7Q6UWV6 458 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 LRRC31Q6UY01 552 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ENOSF1Q7L5Y1 443 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ABI3BPQ7Z7G0 1075 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PRPF39Q86UA1 669 aaKnown RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 TRIM69Q86WT6 500 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ZFAND4Q86XD8 727 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 TTC30BQ8N4P2 665 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 TTC39CQ8N584 583 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PQLC3Q8N755 202 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 RAPGEF5Q92565 580 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 KRT35Q92764 455 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 EXOC4Q96A65 974 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 AZIN2Q96A70 460 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NTAN1Q96AB6 310 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MMABQ96EY8 250 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SLC47A1Q96FL8 570 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PGAP3Q96FM1 320 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CCDC34Q96HJ3 373 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PRAC1Q96KF2 57 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CSPG4P5Q96PW8 444 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF300Q96RE9 604 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NR1H4Q96RI1 486 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 RUFY1Q96T51 708 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NCAPGQ9BPX3 1015 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 DESI2Q9BSY9 194 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SLC17A9Q9BYT1 436 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SLC25A18Q9H1K4 315 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 EPB41L5Q9HCM4 733 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PCDHB16Q9NRJ7 776 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SEPT10Q9P0V9 454 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 APOBEC3BQ9UH17 382 aaKnown RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SUN2Q9UH99 717 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CIDEBQ9UHD4 219 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SLC13A4Q9UKG4 626 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PACSIN2Q9UNF0 486 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CHKBQ9Y259 395 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NCKAP1Q9Y2A7 1128 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 NEUROG3Q9Y4Z2 214 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 TMEM184BQ9Y519 407 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 FREM2Q5SZK8 3169 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 MED12Q93074 2177 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF407Q9C0G0 2248 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF462Q96JM2 2506 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 IGHV4-4A0A075B6R2 117 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 LRRD1A4D1F6 860 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 PRAMEF26H0Y7S4 382 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 K7EM74 188 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 LOC400499M0QZD8 3231 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 AQP9O43315 295 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 DUX1O43812 170 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 PRAMEF11O60813 436 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 RNASEH1O60930 286 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 UTP20O75691 2785 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 TM7SF2O76062 418 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 RECQL5O94762 991 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 AP2A2O94973 939 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 GSRP00390 522 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 FGF1P05230 155 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 RPLP0P05388 317 aaKnown RBP2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CALB1P05937 261 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 POLBP06746 335 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 CCL4P13236 92 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 ACADSP16219 412 aa2.72□□□□□ -1.97
PTCD3-218ENST00000493430 GATA2P23769 480 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms