RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 SLC39A8Q9C0K1 460 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 SARS2Q9NP81 518 aaKnown RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 C14orf105Q9NVL8 296 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 FAM50BQ9Y247 325 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 TMEM218A2RU14 115 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 C9orf170A2RU37 121 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 GFYI3L273 518 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 GPR31O00270 319 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 GABRPO00591 440 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 TO15178 435 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 GSTZ1O43708 216 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 VEGFDO43915 354 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 ULK1O75385 1050 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 B3GALT4O96024 378 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 EIF4EP06730 217 aaKnown RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 HOXC4P09017 264 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 PPIBP23284 216 aaKnown RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 MPGP29372 298 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 THBS2P35442 1172 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 CHI3L1P36222 383 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 CCR6P51684 374 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 IL2P60568 153 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 DUSP4Q13115 394 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 KLF9Q13886 244 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 MBTPS1Q14703 1052 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 HEPACAMQ14CZ8 416 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 FAM180BQ6P0A1 224 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 SLC9B2Q86UD5 537 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 CBLN2Q8IUK8 224 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 SERPINA12Q8IW75 414 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 FGF11Q92914 225 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 CPNE4Q96A23 557 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 PNPLA2Q96AD5 504 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 ABHD1Q96SE0 405 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 IFT27Q9BW83 186 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 TKTL2Q9H0I9 626 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 WDCPQ9H6R7 721 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 NMNAT1Q9HAN9 279 aaPredicted RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 TAS2R3Q9NYW6 316 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 NTMQ9P121 344 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 EXOSC1Q9Y3B2 195 aaKnown RBP9.17□□□□□ -0.94
VPS8-225ENST00000492449 KCTD3Q9Y597 815 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 PCDHB11Q9Y5F2 797 aa9.17□□□□□ -0.94
VPS8-225ENST00000492449 PRAMEF25A6NGN4 478 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 MANBAO00462 879 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 LILRB5O75023 590 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 SEMA7AO75326 666 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 CXCL14O95715 111 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 PEX11BO96011 259 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 IQCF3P0C7M6 154 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 UBBP0CG47 229 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 UBCP0CG48 685 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 ZNF865P0CJ78 1059 aaPredicted RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 CBSLP0DN79 551 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 IFNGR1P15260 489 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 CBSP35520 551 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 MECP2P51608 486 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 TAS2R60P59551 318 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 RPS27AP62979 156 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 UBA52P62987 128 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 MAT1AQ00266 395 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 PON3Q15166 354 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 SF1Q15637 639 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 AMHR2Q16671 573 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 XKR6Q5GH73 641 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 ELFN2Q5R3F8 820 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 ARTNQ5T4W7 220 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 FAM69AQ5T7M9 428 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 C9orf131Q5VYM1 1079 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 WDSUB1Q8N9V3 476 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 OR10K1Q8NGX5 313 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 HUS1BQ8NHY5 278 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 HAVCR2Q8TDQ0 301 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 EXOSC8Q96B26 276 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 UTP23Q9BRU9 249 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 NTMT1Q9BV86 223 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 POLDIP3Q9BY77 421 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 GLIS2Q9BZE0 524 aaPredicted RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 OPA3Q9H6K4 179 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 WDR26Q9H7D7 661 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 DDIT4Q9NX09 232 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 KCND3Q9UK17 655 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 DLGAP4Q9Y2H0 992 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 RLFQ13129 1914 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 CTDSPLO15194 276 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 PPM1DO15297 605 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 EIF4E2O60573 245 aaKnown RBP9.16□□□□□ -0.94
VPS8-225ENST00000492449 EGFP01133 1207 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 RB1P06400 928 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 GP1BAP07359 652 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 EBLN1P0CF75 366 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 CNR1P21554 472 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 PSMA3P25788 255 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 CCR1P32246 355 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 KIR3DL1P43629 444 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 POU3F4P49335 361 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 NDUFV1P49821 464 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 WNT3P56703 355 aa9.16□□□□□ -0.94
VPS8-225ENST00000492449 DAOAP59103 153 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms