RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, human

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-215	ENST00000491987	GATA5	Q9BWX5	397 aa	Predicted RBP	13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	OSBPL11	Q9BXB4	747 aa		13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	MYNN	Q9NPC7	610 aa		13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	MKS1	Q9NXB0	559 aa		13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	KLRF1	Q9NZS2	232 aa		13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	CCL27	Q9Y4X3	112 aa		13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	EXPH5	Q8NEV8	1989 aa		13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	PCNX1	Q96RV3	2341 aa		13.72	□□□□□ -0.21
TOM1-215	ENST00000491987	C2orf72	A6NCS6	295 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	PRAMEF25	A6NGN4	478 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	T	O15178	435 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	ERN1	O75460	977 aa	Known RBP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	JUN	P05412	331 aa	Known RBP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	HPN	P05981	417 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	MPI	P34949	423 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	CDK9	P50750	372 aa	Known RBP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	NCBP2	P52298	156 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	CORO7	P57737	925 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	TIGD3	Q6B0B8	471 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	NOXRED1	Q6NXP6	359 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	ZNF295-AS1	Q8N0V1	137 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	BANP	Q8N9N5	519 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	OR7G2	Q8NG99	324 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	OR1J4	Q8NGS1	313 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	FAM76A	Q8TAV0	307 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	AEN	Q8WTP8	325 aa	Known RBP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	NTNG2	Q96CW9	530 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	ERP27	Q96DN0	273 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	VSTM2L	Q96N03	204 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	FAM111A	Q96PZ2	611 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	BTBD9	Q96Q07	612 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	SPOCK3	Q9BQ16	436 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	ENKD1	Q9H0I2	346 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	UBQLN3	Q9H347	655 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	FOLH1B	Q9HBA9	442 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	GALNT9	Q9HCQ5	603 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	KCNJ16	Q9NPI9	418 aa		13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987	EXO1	Q9UQ84	846 aa	Known RBP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987		V9GYY5	206 aa	Predicted RBP	13.71	□□□□□ -0.21
TOM1-215	ENST00000491987		A0A0G2JNJ9	132 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	MYO1G	B0I1T2	1018 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	SLC28A1	O00337	649 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	AZIN1	O14977	448 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	SNPH	O15079	494 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	RGS14	O43566	566 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	PLOD3	O60568	738 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	TRIM13	O60858	407 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	ICOSLG	O75144	302 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	SPAG7	O75391	227 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	SEC22B	O75396	215 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	REM1	O75628	298 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	TOX	O94900	526 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	CT45A8	P0DMV1	189 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	CT45A9	P0DMV2	189 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	GABRA1	P14867	456 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	ELAVL4	P26378	380 aa	Known RBP	13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	PTPN6	P29350	595 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	ALDH3A1	P30838	453 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	ADH7	P40394	386 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	PTGDS	P41222	190 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	MC3R	P41968	323 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	TFF3	Q07654	80 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	CRYZ	Q08257	329 aa	Known RBP	13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	ZNF155	Q12901	538 aa	Predicted RBP	13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	EIPR1	Q53HC9	387 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	CT45A2	Q5DJT8	189 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	SLC30A6	Q6NXT4	461 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	TMEM81	Q6P7N7	255 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	NPSR1	Q6W5P4	371 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	ULK2	Q8IYT8	1036 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	COL21A1	Q96P44	957 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	TRMO	Q9BU70	441 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	MECR	Q9BV79	373 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	LRTM1	Q9HBL6	345 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	SLC17A7	Q9P2U7	560 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987		Q9UFV3	132 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	LGALS13	Q9UHV8	139 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	MAPRE3	Q9UPY8	281 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	SLC6A5	Q9Y345	797 aa		13.7	□□□□□ -0.22
TOM1-215	ENST00000491987	OR6C70	A6NIJ9	312 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	COQ9	O75208	318 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	HOXD4	P09016	255 aa	Predicted RBP	13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	PRPH2	P23942	346 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	TACR1	P25103	407 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	NTS	P30990	170 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	ZFP36L2	P47974	494 aa	Known RBP	13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	SNTA1	Q13424	505 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	EMB	Q6PCB8	327 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	TMEM107	Q6UX40	140 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	IKBIP	Q70UQ0	350 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	YRDC	Q86U90	279 aa	Known RBP	13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	ACBD4	Q8NC06	268 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	OR2T11	Q8NH01	316 aa		13.69	□□□□□ -0.22
TOM1-215	ENST00000491987	GFM2	Q969S9	779 aa	Known RBP	13.69	□□□□□ -0.22

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