RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 GRK3P35626 688 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 EFNA3P52797 238 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 MAT1AQ00266 395 aaKnown RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 PIGFQ07326 219 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 MAD2L1Q13257 205 aaPredicted RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 DOC2AQ14183 400 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 MAPKAPK3Q16644 382 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 VWA2Q5GFL6 755 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 CPZQ66K79 652 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 ATG9BQ674R7 924 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 LAPTM4BQ86VI4 370 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 HIPK1Q86Z02 1210 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 ZCCHC7Q8N3Z6 543 aaKnown RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 SCAIQ8N9R8 606 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 GLB1L3Q8NCI6 653 aaPredicted RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 OR2Y1Q8NGV0 311 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 CREB3L4Q8TEY5 395 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 UBTD2Q8WUN7 234 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 MMABQ96EY8 250 aaPredicted RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 AIF1LQ9BQI0 150 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 FAM117AQ9C073 453 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 KLHL31Q9H511 634 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 GPRC5BQ9NZH0 403 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 EIF3LQ9Y262 564 aaKnown RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 TMED5Q9Y3A6 229 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 CXCR6O00574 342 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 BCKDKO14874 412 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 NDUFS4O43181 175 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PRKD3O94806 890 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 ANGPTL1O95841 491 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 TBX6O95947 436 aaPredicted RBP8.81□□□□□ -1
BRCA1-219ENST00000491747 OTCP00480 354 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 SERPIND1P05546 499 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 IL1RNP18510 177 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 OTX2P32243 289 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 DCTP40126 519 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 FOLR3P41439 243 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PLIN5Q00G26 463 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 IL5RAQ01344 420 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 EMX1Q04741 257 aaPredicted RBP8.81□□□□□ -1
BRCA1-219ENST00000491747 CHAF1BQ13112 559 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 FAM53BQ14153 422 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 SLBPQ14493 270 aaKnown RBP eCLIP8.81□□□□□ -1
BRCA1-219ENST00000491747 SSPNQ14714 243 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PCBP2Q15366 365 aaKnown RBP eCLIP8.81□□□□□ -12e-7■■■□□ 17.1
BRCA1-219ENST00000491747 RFTN2Q52LD8 501 aaPredicted RBP8.81□□□□□ -1
BRCA1-219ENST00000491747 AGAP7PQ5VUJ5 663 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 VN1R5Q7Z5H4 357 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 ADCK1Q86TW2 530 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 HS3ST5Q8IZT8 346 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 CAMKVQ8NCB2 501 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 NT5CQ8TCD5 201 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 STT3BQ8TCJ2 826 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 FAR1Q8WVX9 515 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 SLC39A7Q92504 469 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 NCLNQ969V3 563 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 HBEGFQ99075 208 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 C17orf62Q9BQA9 187 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 POLHQ9Y253 713 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 TPRKBQ9Y3C4 175 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 FAM208BQ5VWN6 2430 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 BSNQ9UPA5 3926 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 IGLV3-12A0A075B6K2 115 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 SGK494L7N484 410 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 RGS14O43566 566 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 JRKO75564 520 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 C1QL1O75973 258 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 NADKO95544 446 aaPredicted RBP8.81□□□□□ -1
BRCA1-219ENST00000491747 IL6P05231 212 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 ZGLP1P0C6A0 271 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 ITGAMP11215 1152 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 FBLP22087 321 aaKnown RBP8.81□□□□□ -1
BRCA1-219ENST00000491747 AHRP35869 848 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 HTR6P50406 440 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 CHIT1Q13231 466 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 CDK5R2Q13319 367 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 LAPTM5Q13571 262 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 DSG2Q14126 1118 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 E2F2Q14209 437 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 KIAA0040Q15053 153 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 INAQ16352 499 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 FAM174BQ3ZCQ3 159 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 XKR6Q5GH73 641 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 LAIR2Q6ISS4 152 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 TMEM53Q6P2H8 277 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PLEKHG7Q6ZR37 379 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 LRRC70Q7Z2Q7 622 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PPP1R32Q7Z5V6 425 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 P2RY8Q86VZ1 359 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 PRSS58Q8IYP2 241 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 CADM3Q8N126 398 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 OR4F6Q8NGB9 312 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 ZFP90Q8TF47 636 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 GTF2H4Q92759 462 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 WDR34Q96EX3 536 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 MVB12AQ96EY5 273 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 WBP1Q96G27 269 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 ARHGAP9Q9BRR9 750 aa8.81□□□□□ -1
BRCA1-219ENST00000491747 SLC6A16Q9GZN6 736 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms