RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 A0A1W2PPB8 328 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 A0A1W2PRS3 328 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ANKUB1A6NFN9 424 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 KIR3DP1A8MWS1 328 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TP53I11O14683 189 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PPM1BO75688 479 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CT45A8P0DMV1 189 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CT45A9P0DMV2 189 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NAGAP17050 411 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CLNS1AP54105 237 aaKnown RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CORO7P57737 925 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PSPHP78330 225 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 RPP38P78345 283 aaKnown RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 KCNC4Q03721 635 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ELOAQ14241 798 aaKnown RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ZNHIT3Q15649 155 aaPredicted RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PGS1Q32NB8 556 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CT45A2Q5DJT8 189 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PRAMEF20Q5VT98 475 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NPSR1Q6W5P4 371 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 GK5Q6ZS86 529 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SLC44A2Q8IWA5 706 aaPredicted RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ZFP62Q8NB50 900 aaPredicted RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NUP43Q8NFH3 380 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SPPL2AQ8TCT8 520 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 OR5P2Q8WZ92 322 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 C3orf14Q9HBI5 128 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 MED4Q9NPJ6 270 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SIRT3Q9NTG7 399 aaPredicted RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CNIH4Q9P003 139 aa14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CNOT11Q9UKZ1 510 aaKnown RBP14.98□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PINLYPA6NC86 204 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ANKRD28O15084 1053 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 EMC8O43402 210 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ATP8B1O43520 1251 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 DIAPH2O60879 1101 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TGDSO95455 350 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ABCB1P08183 1280 aaPredicted RBP14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PIGAP37287 484 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 RFC3P40938 356 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 DNASE1L1P49184 302 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PSG6Q00889 435 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PLGLB1Q02325 96 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 LSM12Q3MHD2 195 aaKnown RBP14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 RGS9BPQ6ZS82 235 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ACAD11Q709F0 780 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SZRD1Q7Z422 152 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SIAH3Q8IW03 269 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ARFGAP2Q8N6H7 521 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CEP70Q8NHQ1 597 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TMBIM1Q969X1 311 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TESCQ96BS2 214 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 MS4A4EQ96PG1 132 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 OR52B2Q96RD2 323 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SECISBP2Q96T21 854 aaKnown RBP14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TSPAN10Q9H1Z9 355 aaPredicted RBP14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NEUROD4Q9HD90 331 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 EQTNQ9NQ60 294 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NTMQ9P121 344 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 OR10H1Q9Y4A9 318 aa14.97□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 E9PBE3 544 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NPIPA5E9PKD4 350 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ACOT7O00154 380 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TFECO14948 347 aaPredicted RBP14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 C6orf47O95873 294 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 KRT20P35900 424 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 KIR3DL1P43629 444 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PRKAG1P54619 331 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NME5P56597 212 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PRR5P85299 388 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 DPY19L1Q2PZI1 675 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 RNFT1Q5M7Z0 435 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TBCELQ5QJ74 424 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 OR4F3Q6IEY1 312 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 EPGNQ6UW88 154 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 GFRALQ6UXV0 394 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NUP54Q7Z3B4 507 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 OR8J2Q8NGG1 315 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 PSMA8Q8TAA3 256 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 DIO2Q92813 273 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 HGDQ93099 445 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 FAM120BQ96EK7 910 aaKnown RBP14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 MARK4Q96L34 752 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 GPR137Q96N19 417 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 LMF2Q9BU23 707 aaKnown RBP14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 TTTY12Q9BZ98 90 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 CLMPQ9H6B4 373 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 ZCCHC3Q9NUD5 404 aaKnown RBP14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SEC14L3Q9UDX4 400 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 NPIPA1Q9UND3 350 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 SNX8Q9Y5X2 465 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 GPR45Q9Y5Y3 372 aa14.96□□□□□ -0.01
MSH5-SAPCD1-206ENST00000491552 EXPH5Q8NEV8 1989 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ANKRD33BA6NCL7 494 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 OR6C70A6NIJ9 312 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 TTC36A6NLP5 189 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 RNASET2O00584 256 aaKnown RBP14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 CFLARO15519 480 aa14.95□□□□□ -0.02
MSH5-SAPCD1-206ENST00000491552 ABCB7O75027 752 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms