RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NCLNQ969V3 563 aa20.21■□□□□ 0.83
VCPKMT-204ENST00000491402 OTUB1Q96FW1 271 aaPredicted RBP20.21■□□□□ 0.83
VCPKMT-204ENST00000491402 NUDT9Q9BW91 350 aa20.21■□□□□ 0.83
VCPKMT-204ENST00000491402 DTX4Q9Y2E6 619 aa20.21■□□□□ 0.83
VCPKMT-204ENST00000491402 TNFRSF21O75509 655 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 CREG1O75629 220 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 NUDT7P0C024 238 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 HSD17B1P14061 328 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 MAGEA8P43361 318 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 MAN2A2P49641 1150 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 KHKP50053 298 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 SLC26A5P58743 744 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 ZNF155Q12901 538 aaPredicted RBP20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 CDC73Q6P1J9 531 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 ZCCHC12Q6PEW1 402 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 LGI4Q8N135 537 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 CDRT4Q8N9R6 151 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 SLC16A11Q8NCK7 471 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 OR2T12Q8NG77 320 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 VSTM2LQ96N03 204 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 KCTD14Q9BQ13 255 aaPredicted RBP20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 FOLH1BQ9HBA9 442 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 PRODH2Q9UF12 536 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 USP22Q9UPT9 525 aa20.2■□□□□ 0.82
VCPKMT-204ENST00000491402 HMGN4O00479 90 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 RRP8O43159 456 aaKnown RBP20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 BMP2P12643 396 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 DSTNP60981 165 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 ADRM1Q16186 407 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 NET1Q7Z628 596 aaPredicted RBP20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 ADAMTS17Q8TE56 1095 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 SLC9A6Q92581 669 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 HOXB13Q92826 284 aaPredicted RBP20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 RAB8BQ92930 207 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 CCDC124Q96CT7 223 aaKnown RBP20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 REXO5Q96IC2 774 aaKnown RBP20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 OR7D2Q96RA2 312 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 SEMA4CQ9C0C4 833 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 PCSK5Q92824 1860 aa20.19■□□□□ 0.82
VCPKMT-204ENST00000491402 FAM220BPB1ANY3 271 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 OR12D1P0DN82 309 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 ME2P23368 584 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 MSX2P35548 267 aaPredicted RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 ANXA11P50995 505 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 TXNL4AP83876 142 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 EXOSC6Q5RKV6 272 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 MRGPREQ86SM8 312 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 PTOV1Q86YD1 416 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 RAB43Q86YS6 212 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 SPACA3Q8IXA5 215 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 C9orf40Q8IXQ3 194 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 KDF1Q8NAX2 398 aaPredicted RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 VMP1Q96GC9 406 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 IMMP1LQ96LU5 166 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 EFHD1Q9BUP0 239 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 SPATA9Q9BWV2 254 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 SLC7A8Q9UHI5 535 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 CFL2Q9Y281 166 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 NSG1A0A0A6YYJ2 146 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 TMEM8BA6NDV4 472 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 ASNA1O43681 348 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 ACP2P11117 423 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 NQO1P15559 274 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 SOX11P35716 441 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 MAP3K8P41279 467 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 PSG6Q00889 435 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 GCNT6Q5T4J0 391 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 NDUFAF7Q7L592 441 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 ADAMTS15Q8TE58 950 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 MAL2Q969L2 176 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 LMF2Q9BU23 707 aaKnown RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 P4HTMQ9NXG6 502 aa20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 ZNF223Q9UK11 482 aaPredicted RBP20.18■□□□□ 0.82
VCPKMT-204ENST00000491402 DUXAA6NLW8 204 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 OR6C76A6NM76 312 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 WT1P19544 449 aaPredicted RBP20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 MYBPC3Q14896 1274 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 EXT1Q16394 746 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 DUSP5Q16690 384 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 ZZZ3Q8IYH5 903 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 XAGE5Q8WWM1 108 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 VPS50Q96JG6 964 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 RAB3IPQ96QF0 476 aaPredicted RBP20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 CCNL2Q96S94 520 aaPredicted RBP20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 STACQ99469 402 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 ITPAQ9BY32 194 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 TMEM38AQ9H6F2 299 aa20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 THUMPD1Q9NXG2 353 aaKnown RBP20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 SUCOQ9UBS9 1254 aaKnown RBP20.17■□□□□ 0.82
VCPKMT-204ENST00000491402 MAP1BP46821 2468 aaKnown RBP20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 ELOVL7A1L3X0 281 aa20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 CFAP73A6NFT4 308 aa20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 EFSO43281 561 aa20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 ALOX5P09917 674 aa20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 HTR1EP28566 365 aa20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 CORO7P57737 925 aa20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 EBPQ15125 230 aaKnown RBP20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 ZNHIT3Q15649 155 aaPredicted RBP20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 BTBD16Q32M84 506 aa20.16■□□□□ 0.82
VCPKMT-204ENST00000491402 PLAG1Q6DJT9 500 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms