RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RNF4P78317 190 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 PSPHP78330 225 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 AIMP2Q13155 320 aaKnown RBP17.28■□□□□ 0.36
MCF2L-230ENST00000491028 SELPLGQ14242 412 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.28■□□□□ 0.36
MCF2L-230ENST00000491028 ATP1A1-AS1Q5TC04 95 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 HLA-DQA1Q5Y7H0 255 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 BNC2Q6ZN30 1099 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-230ENST00000491028 SLC15A3Q8IY34 581 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 KBTBD2Q8IY47 623 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 ARHGAP24Q8N264 748 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 ADAMTS15Q8TE58 950 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 JADE3Q92613 823 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 BTBD9Q96Q07 612 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 OR7D2Q96RA2 312 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 SPATA9Q9BWV2 254 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 DEFB126Q9BYW3 111 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 WWTR1Q9GZV5 400 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 OR51I1Q9H343 314 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 PIGUQ9H490 435 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 DUSP22Q9NRW4 184 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 RYDENQ9NUL5 291 aaKnown RBP17.28■□□□□ 0.36
MCF2L-230ENST00000491028 TMEM181Q9P2C4 612 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 PRPF19Q9UMS4 504 aaKnown RBP17.28■□□□□ 0.36
MCF2L-230ENST00000491028 DTX4Q9Y2E6 619 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 DNAJA2O60884 412 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 NKX2-2O95096 273 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 C1QCP02747 245 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 ACP2P11117 423 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 PPICP45877 212 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 UCNP55089 124 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 EEFSECP57772 596 aaKnown RBP17.27■□□□□ 0.36
MCF2L-230ENST00000491028 DSTNP60981 165 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 RPS26P62854 115 aaKnown RBP17.27■□□□□ 0.36
MCF2L-230ENST00000491028 PSG6Q00889 435 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 CHAF1BQ13112 559 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 SPATS1Q496A3 300 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 COX20Q5RI15 118 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 JMJD6Q6NYC1 403 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-230ENST00000491028 TNFAIP8L2Q6P589 184 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-230ENST00000491028 CCDC81Q6ZN84 652 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 SERPINA11Q86U17 422 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 KIF2BQ8N4N8 673 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 HORMAD2Q8N7B1 307 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 ZNF441Q8N8Z8 693 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 CLEC1AQ8NC01 280 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 SLC9A6Q92581 669 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 ADIPOR1Q96A54 375 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 TP53INP1Q96A56 240 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 C16orf58Q96GQ5 468 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 DCBLD2Q96PD2 775 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 ECSITQ9BQ95 431 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 YIPF4Q9BSR8 244 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 TRIM8Q9BZR9 551 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 LRMDAQ9H2I8 198 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 Q9N2J8 555 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 ATP13A2Q9NQ11 1180 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 CMTM6Q9NX76 183 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 PCDHGB3Q9Y5G1 929 aa17.27■□□□□ 0.36
MCF2L-230ENST00000491028 FRG2CA6NGY1 282 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 NME4O00746 187 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 ETFAP13804 333 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 DRD5P21918 477 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 TLE3Q04726 772 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 Q0VFX4 171 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 DUSP5Q16690 384 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 SAMD4BQ5PRF9 694 aaKnown RBP17.26■□□□□ 0.35
MCF2L-230ENST00000491028 NET1Q7Z628 596 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-230ENST00000491028 PROSER1Q86XN7 944 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 SLC16A11Q8NCK7 471 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 OR5D16Q8NGK9 328 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 LCORQ96JN0 433 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-230ENST00000491028 GAL3ST4Q96RP7 486 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 EXD2Q9NVH0 621 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 ADA2Q9NZK5 511 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 GPR55Q9Y2T6 319 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-230ENST00000491028 CEP295Q9C0D2 2601 aa17.26■□□□□ 0.35
MCF2L-230ENST00000491028 FAM220BPB1ANY3 271 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 HMGN4O00479 90 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 TO15178 435 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 ACOX3O15254 700 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 PRKNO60260 465 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-230ENST00000491028 NME6O75414 186 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-230ENST00000491028 TNFRSF21O75509 655 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 AK1P00568 194 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 CELA2AP08217 269 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 OR12D1P0DN82 309 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 ITGAMP11215 1152 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 TRHRP34981 398 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-230ENST00000491028 CASP9P55211 416 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 RBBP4Q09028 425 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 CYP51A1Q16850 503 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 GCNT6Q5T4J0 391 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 ATAD3BQ5T9A4 648 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 H3F3CQ6NXT2 135 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 NPSR1Q6W5P4 371 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 CALHM3Q86XJ0 350 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 ARMC10Q8N2F6 343 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 SLC5A8Q8N695 610 aa17.25■□□□□ 0.35
MCF2L-230ENST00000491028 COX18Q8N8Q8 333 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms