RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 MAPRE2Q15555 327 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 SPDYE7PQ495Y7 208 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 TIGD2Q4W5G0 525 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 AGKQ53H12 422 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 COQ5Q5HYK3 327 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 MFSD12Q6NUT3 480 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 LYPD8Q6UX82 237 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 RBMXL3Q8N7X1 1067 aaKnown RBP14.63□□□□□ -0.07
TRA2A-208ENST00000490942 SIMC1Q8NDZ2 872 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 MIPOL1Q8TD10 442 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 THAP3Q8WTV1 239 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-208ENST00000490942 ASB15Q8WXK1 588 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 PNPLA2Q96AD5 504 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 SPACA9Q96E40 222 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-208ENST00000490942 SECISBP2Q96T21 854 aaKnown RBP14.63□□□□□ -0.07
TRA2A-208ENST00000490942 STACQ99469 402 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 NXF5Q9H1B4 397 aaKnown RBP14.63□□□□□ -0.07
TRA2A-208ENST00000490942 ZBTB20Q9HC78 741 aaPredicted RBP14.63□□□□□ -0.07
TRA2A-208ENST00000490942 DUSP22Q9NRW4 184 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 GPATCH2Q9NW75 528 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 MRTO4Q9UKD2 239 aaKnown RBP14.63□□□□□ -0.07
TRA2A-208ENST00000490942 VPS4AQ9UN37 437 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 ERVK-11Q9UQG0 969 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 B3GNT3Q9Y2A9 372 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 DTX4Q9Y2E6 619 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 SNX8Q9Y5X2 465 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 GMEB1Q9Y692 573 aa14.63□□□□□ -0.07
TRA2A-208ENST00000490942 ZFYVE26Q68DK2 2539 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 DUXAA6NLW8 204 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 A8MVJ9 347 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 K7EM74 188 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 RFXANKO14593 260 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 NKX2-2O95096 273 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ABCB1P08183 1280 aaPredicted RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 EFNA1P20827 205 aaPredicted RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 NR0B1P51843 470 aaKnown RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 MRPS22P82650 360 aaKnown RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ZNF155Q12901 538 aaPredicted RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 LY6DQ14210 128 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 INAQ16352 499 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ZNF791Q3KP31 576 aaPredicted RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 RPUSD3Q6P087 351 aaKnown RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 RTL4Q6ZR62 310 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ANKRD46Q86W74 232 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ANKS4BQ8N8V4 417 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 MDS2Q8NDY4 140 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 GTF2H4Q92759 462 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 NEURL3Q96EH8 262 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 CCT8L2Q96SF2 557 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ACTRT3Q9BYD9 372 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ANKRA2Q9H9E1 313 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 Q9N2J8 555 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ZNF71Q9NQZ8 489 aaPredicted RBP14.62□□□□□ -0.07
TRA2A-208ENST00000490942 HPF1Q9NWY4 346 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 LRFN1Q9P244 771 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 ANAPC2Q9UJX6 822 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 NDUFAF1Q9Y375 327 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 PCDHGB3Q9Y5G1 929 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 NPFFR2Q9Y5X5 522 aa14.62□□□□□ -0.07
TRA2A-208ENST00000490942 A0A096LPI6 279 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 RNF103-CHMP3A0A140T963 221 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 C9JVG2 144 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 ASNA1O43681 348 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 NEURL1O76050 574 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 CPSF4O95639 269 aaKnown RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 AGR2O95994 175 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 HMGN2P05204 90 aaKnown RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 SNRPB2P08579 225 aaKnown RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 CD46P15529 392 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 CAPN3P20807 821 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 ABCD3P28288 659 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 LCN1P31025 176 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 SOX3P41225 446 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 PSMD4P55036 377 aaKnown RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 RPP38P78345 283 aaKnown RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 OC90Q02509 493 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 TP53BP2Q13625 1128 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 ZNF169Q14929 603 aaPredicted RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 OR1C1Q15619 314 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 NTRK2Q16620 822 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 LRIF1Q5T3J3 769 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 SAXO2Q658L1 398 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 CDC73Q6P1J9 531 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 TMEM81Q6P7N7 255 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 MTERF4Q7Z6M4 381 aaKnown RBP14.61□□□□□ -0.07
TRA2A-208ENST00000490942 SLC34A3Q8N130 599 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 CYP4Z2PQ8N1L4 340 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 DPP10Q8N608 796 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 TEX19Q8NA77 164 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 TMEM178AQ8NBL3 297 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 SLC39A7Q92504 469 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 TMEM125Q96AQ2 219 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 VPS33AQ96AX1 596 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 SLC35A4Q96G79 324 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 SCMH1Q96GD3 660 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 MAGED4Q96JG8 741 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 NMUR2Q9GZQ4 415 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 FAM107BQ9H098 131 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 PIGUQ9H490 435 aa14.61□□□□□ -0.07
TRA2A-208ENST00000490942 TIMMDC1Q9NPL8 285 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms