RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ITM2AO43736 263 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 LYPLA1O75608 230 aaPredicted RBP9.52□□□□□ -0.89
TTC28-207ENST00000490475 FGF4P08620 206 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 LINC00032P0C843 101 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 DHRS4L1P0CG22 281 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 GLI4P10075 376 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 PIGAP37287 484 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 MAPK12P53778 367 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 ERVK-8P63133 956 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 ZNF267Q14586 743 aaPredicted RBP9.52□□□□□ -0.89
TTC28-207ENST00000490475 EBPQ15125 230 aaKnown RBP9.52□□□□□ -0.89
TTC28-207ENST00000490475 RPS6KA2Q15349 733 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 CHI3L2Q15782 390 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 UGT3A2Q3SY77 523 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 TRIM46Q7Z4K8 759 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 PACS2Q86VP3 889 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 TMEM200AQ86VY9 491 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 CCDC71Q8IV32 467 aaPredicted RBP9.52□□□□□ -0.89
TTC28-207ENST00000490475 GALNT12Q8IXK2 581 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 ZNF321PQ8N8H1 164 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 ANKRD42Q8N9B4 389 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 OR7G1Q8NGA0 311 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 OR4K14Q8NGD5 310 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 AGR3Q8TD06 166 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 BCAS4Q8TDM0 211 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 NINJ1Q92982 152 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 ARL8AQ96BM9 186 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 GAL3ST4Q96RP7 486 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 STMN4Q9H169 189 aaPredicted RBP9.52□□□□□ -0.89
TTC28-207ENST00000490475 TUBB1Q9H4B7 451 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
TTC28-207ENST00000490475 ZDHHC2Q9UIJ5 367 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 CES1P1Q9UKY3 287 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 PSME2Q9UL46 239 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 ERVK-19Q9WJR5 959 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 TRAF6Q9Y4K3 522 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 CCL27Q9Y4X3 112 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 FAM215AQ9Y5M1 114 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 CHCHD2Q9Y6H1 151 aaPredicted RBP9.52□□□□□ -0.89
TTC28-207ENST00000490475 CSMD2Q7Z408 3487 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 A0A0G2JMM0 328 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 A0A1W2PPB8 328 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 A0A1W2PRS3 328 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 KIR3DP1A8MWS1 328 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 HRKO00198 91 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 BIRC5O15392 142 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 GOSR1O95249 250 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 NADKO95544 446 aaPredicted RBP9.51□□□□□ -0.89
TTC28-207ENST00000490475 IL2RAP01589 272 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 FREM3P0C091 2139 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 NAGAP17050 411 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 GDF1P27539 372 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 TIMP3P35625 211 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 WDR4P57081 412 aaKnown RBP9.51□□□□□ -0.89
TTC28-207ENST00000490475 GNGT1P63211 74 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 PSPHP78330 225 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 ACSM2AQ08AH3 577 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 TESK1Q15569 626 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 IMPG1Q17R60 797 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 SH2D4BQ5SQS7 431 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
TTC28-207ENST00000490475 KANK2Q63ZY3 851 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 ACSM2BQ68CK6 577 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 FAM180BQ6P0A1 224 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 Q6ZSR9 355 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 LACC1Q8IV20 430 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 PPP1R14CQ8TAE6 165 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 MGARPQ8TDB4 240 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 C16orf78Q8WTQ4 265 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 DIO2Q92813 273 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 TLCD1Q96CP7 247 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 HSPBAP1Q96EW2 488 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 C11orf24Q96F05 449 aaPredicted RBP9.51□□□□□ -0.89
TTC28-207ENST00000490475 EBPLQ9BY08 206 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 UCK2Q9BZX2 261 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 C20orf27Q9GZN8 174 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 CXorf21Q9HAI6 301 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 EML4Q9HC35 981 aaKnown RBP9.51□□□□□ -0.89
TTC28-207ENST00000490475 ALKBH4Q9NXW9 302 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 HEY2Q9UBP5 337 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 ZNF629Q9UEG4 869 aaPredicted RBP9.51□□□□□ -0.89
TTC28-207ENST00000490475 MCM8Q9UJA3 840 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 PCDHA9Q9Y5H5 950 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 DNAJC15Q9Y5T4 150 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 NPFFR2Q9Y5X5 522 aa9.51□□□□□ -0.89
TTC28-207ENST00000490475 A0A0G2JNJ9 132 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 GNG14A0A1W2PPG7 69 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 TMEM120BA0PK00 339 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 C1orf226A1L170 272 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 FAM221AA4D161 298 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 SLC28A1O00337 649 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 NDUFAB1O14561 156 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 PCDH7O60245 1069 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 ZNF354AO60765 605 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 SEC22BO75396 215 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 EPPINO95925 133 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 FAM107AO95990 144 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 IL3P08700 152 aa9.5□□□□□ -0.89
TTC28-207ENST00000490475 ANXA4P09525 319 aaPredicted RBP9.5□□□□□ -0.89
TTC28-207ENST00000490475 NEFHP12036 1026 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms