RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 HMGCLP35914 325 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 SLC26A5P58743 744 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 HERVK_113P63132 956 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 ERVK-8P63133 956 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 ZNF85Q03923 595 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 PKN2Q16513 984 aaKnown RBP3.02□□□□□ -1.93
CD46-216ENST00000490278 PPP1R3AQ16821 1122 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 MICAQ29983 383 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 PARP6Q2NL67 630 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 LRIT3Q3SXY7 679 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 SLC22A6Q4U2R8 563 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 PARP10Q53GL7 1025 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 TSEN54Q7Z6J9 526 aaKnown RBP3.02□□□□□ -1.93
CD46-216ENST00000490278 CENPSQ8N2Z9 138 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 RNF148Q8N7C7 305 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 OR4F17Q8NGA8 305 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 WDR36Q8NI36 951 aaKnown RBP3.02□□□□□ -1.93
CD46-216ENST00000490278 TYMSOSQ8TAI1 123 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 ZNF671Q8TAW3 534 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 FAM111AQ96PZ2 611 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 OR4F4Q96R69 305 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 ERVK-6Q9BXR3 956 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 NMNAT2Q9BZQ4 307 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.02□□□□□ -1.93
CD46-216ENST00000490278 GPR83Q9NYM4 423 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 SENP1Q9P0U3 644 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 IL20RAQ9UHF4 553 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 FZR1Q9UM11 496 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 PIN4Q9Y237 131 aaKnown RBP3.02□□□□□ -1.93
CD46-216ENST00000490278 KLF2Q9Y5W3 355 aaPredicted RBP3.02□□□□□ -1.93
CD46-216ENST00000490278 ZSCAN5CA6NGD5 496 aaPredicted RBP3.01□□□□□ -1.93
CD46-216ENST00000490278 NPIPA2E9PIF3 369 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 RASGRF2O14827 1237 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 ADAM12O43184 909 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 SRSF10O75494 262 aaKnown RBP3.01□□□□□ -1.93
CD46-216ENST00000490278 RHBDL1O75783 438 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 IGSF6O95976 241 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 TGFAP01135 160 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 HOXB7P09629 217 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 PVRP15151 417 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 PRDX2P32119 198 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 RABIFP47224 123 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 IST1P53990 364 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 ZNF33BQ06732 778 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 PDIA5Q14554 519 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 Q1RN00 199 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 MS4A13Q5J8X5 152 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 TOR1AIP1Q5JTV8 583 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 PRR5LQ6MZQ0 368 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 CCBE1Q6UXH8 406 aaPredicted RBP3.01□□□□□ -1.93
CD46-216ENST00000490278 Q6ZR54 194 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 RBM43Q6ZSC3 357 aaKnown RBP3.01□□□□□ -1.93
CD46-216ENST00000490278 P4HA3Q7Z4N8 544 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 FAM71CQ8NEG0 241 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 OR56B1Q8NGI3 324 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 C14orf79Q96F83 325 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 PIWIL1Q96J94 861 aaKnown RBP3.01□□□□□ -1.93
CD46-216ENST00000490278 SAMD8Q96LT4 415 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 WRAP53Q9BUR4 548 aaKnown RBP3.01□□□□□ -1.93
CD46-216ENST00000490278 C1orf21Q9H246 121 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 HSD3B7Q9H2F3 369 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 TIGARQ9NQ88 270 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 MBD2Q9UBB5 411 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 HOOK1Q9UJC3 728 aaKnown RBP3.01□□□□□ -1.93
CD46-216ENST00000490278 ODF2LQ9ULJ1 636 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 DHRS7Q9Y394 339 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 HCFC1P51610 2035 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 GON4LQ3T8J9 2241 aa3.01□□□□□ -1.93
CD46-216ENST00000490278 C11orf98E9PRG8 122 aa3□□□□□ -1.93
CD46-216ENST00000490278 H3BMH7 237 aa3□□□□□ -1.93
CD46-216ENST00000490278 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3□□□□□ -1.93
CD46-216ENST00000490278 SAP18O00422 153 aaKnown RBP3□□□□□ -1.93
CD46-216ENST00000490278 PRPSAP2O60256 369 aa3□□□□□ -1.93
CD46-216ENST00000490278 SDC3O75056 442 aa3□□□□□ -1.93
CD46-216ENST00000490278 TOXO94900 526 aa3□□□□□ -1.93
CD46-216ENST00000490278 PRAMEF12O95522 483 aa3□□□□□ -1.93
CD46-216ENST00000490278 WNT2P09544 360 aa3□□□□□ -1.93
CD46-216ENST00000490278 SLC35G4P0C7Q5 338 aa3□□□□□ -1.93
CD46-216ENST00000490278 GHRP10912 638 aa3□□□□□ -1.93
CD46-216ENST00000490278 MAPK3P27361 379 aaPredicted RBP3□□□□□ -1.93
CD46-216ENST00000490278 PTPN6P29350 595 aa3□□□□□ -1.93
CD46-216ENST00000490278 RFC2P35250 354 aa3□□□□□ -1.93
CD46-216ENST00000490278 ASMTP46597 345 aa3□□□□□ -1.93
CD46-216ENST00000490278 IL9RQ01113 521 aa3□□□□□ -1.93
CD46-216ENST00000490278 IL1RL1Q01638 556 aa3□□□□□ -1.93
CD46-216ENST00000490278 SRYQ05066 204 aa3□□□□□ -1.93
CD46-216ENST00000490278 GABPB1Q06547 395 aaPredicted RBP3□□□□□ -1.93
CD46-216ENST00000490278 RUNX3Q13761 415 aa3□□□□□ -1.93
CD46-216ENST00000490278 EIF2B1Q14232 305 aaKnown RBP3□□□□□ -1.93
CD46-216ENST00000490278 KARSQ15046 597 aaKnown RBP3□□□□□ -1.93
CD46-216ENST00000490278 ATAD3CQ5T2N8 411 aa3□□□□□ -1.93
CD46-216ENST00000490278 BAIAP2L2Q6UXY1 529 aa3□□□□□ -1.93
CD46-216ENST00000490278 PAQR9Q6ZVX9 377 aa3□□□□□ -1.93
CD46-216ENST00000490278 PRSS48Q7RTY5 328 aa3□□□□□ -1.93
CD46-216ENST00000490278 ADCK1Q86TW2 530 aa3□□□□□ -1.93
CD46-216ENST00000490278 VPS36Q86VN1 386 aa3□□□□□ -1.93
CD46-216ENST00000490278 ARFGAP2Q8N6H7 521 aa3□□□□□ -1.93
CD46-216ENST00000490278 NCLNQ969V3 563 aa3□□□□□ -1.93
CD46-216ENST00000490278 C9orf85Q96MD7 179 aa3□□□□□ -1.93
CD46-216ENST00000490278 RANBP9Q96S59 729 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms