RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 DDX39BQ13838 428 aaKnown RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 LIPJQ5W064 366 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 VWA1Q6PCB0 445 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 AAGABQ6PD74 315 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 ZNF474Q6S9Z5 364 aaPredicted RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 CYP20A1Q6UW02 462 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 PLXDC2Q6UX71 529 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 PLEKHM3Q6ZWE6 761 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 MILR1Q7Z6M3 343 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 NUDT13Q86X67 352 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 PLCZ1Q86YW0 608 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 GBP7Q8N8V2 638 aaPredicted RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 STAG3L4Q8TBR4 150 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 RNF138Q8WVD3 245 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 OMA1Q96E52 524 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 DTNBP1Q96EV8 351 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 ATOH8Q96SQ7 321 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 OSBPL9Q96SU4 736 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 MTERF1Q99551 399 aaKnown RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 DDX47Q9H0S4 455 aaKnown RBP7.41□□□□□ -1.22
USP39-216ENST00000490193 CAB39LQ9H9S4 337 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 GALNT9Q9HCQ5 603 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 SMYD2Q9NRG4 433 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 TAS2R10Q9NYW0 307 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 ZNF639Q9UID6 485 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 MAPRE3Q9UPY8 281 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 CFL2Q9Y281 166 aa7.41□□□□□ -1.22
USP39-216ENST00000490193 USF3Q68DE3 2245 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PRAMEF25A6NGN4 478 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 OR6C70A6NIJ9 312 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 SLC22A20A6NK97 555 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 RNF212BA8MTL3 300 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 C16orf97H3BN30 126 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 FOXE1O00358 373 aaPredicted RBP7.4□□□□□ -1.22
USP39-216ENST00000490193 EMC8O43402 210 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 KERAO60938 352 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 UGT2B11O75310 529 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 SMNDC1O75940 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
USP39-216ENST00000490193 SEMA3DO95025 777 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 ATP1B1P05026 303 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 CPMP14384 443 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 POU2F1P14859 743 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 KIR2DL2P43627 348 aaPredicted RBP7.4□□□□□ -1.22
USP39-216ENST00000490193 STARP49675 285 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 HMGCS1Q01581 520 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 DMTNQ08495 405 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PLCXD2Q0VAA5 305 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 MGAT2Q10469 447 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 MAP4K2Q12851 820 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 FGFBP1Q14512 234 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 FASTKD3Q14CZ7 662 aaKnown RBP7.4□□□□□ -1.22
USP39-216ENST00000490193 GUSBP1Q15486 140 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PRICKLE4Q2TBC4 344 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 KBTBD12Q3ZCT8 623 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 C6orf163Q5TEZ5 329 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 DESI1Q6ICB0 168 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PODNL1Q6PEZ8 512 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 BTLAQ7Z6A9 289 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 ISCA2Q86U28 154 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 GAS2L3Q86XJ1 694 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 ANKMY2Q8IV38 441 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PHC2Q8IXK0 858 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 FBXO36Q8NEA4 188 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 OR4K14Q8NGD5 310 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 WDR20Q8TBZ3 569 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 TMEM171Q8WVE6 324 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 REPS1Q96D71 796 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PGM2Q96G03 612 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 LCORQ96JN0 433 aaPredicted RBP7.4□□□□□ -1.22
USP39-216ENST00000490193 FAM111AQ96PZ2 611 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 RBBP8Q99708 897 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PIGQQ9BRB3 760 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 SLC39A3Q9BRY0 314 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 LRRC1Q9BTT6 524 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 ITPAQ9BY32 194 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 CXorf56Q9H5V9 222 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 KLRF1Q9NZS2 232 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 PPP2R2CQ9Y2T4 447 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 WIF1Q9Y5W5 379 aa7.4□□□□□ -1.22
USP39-216ENST00000490193 ABCA1O95477 2261 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 CCDC189A1A4V9 331 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 FRG2CA6NGY1 282 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 KLF4O43474 513 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 ZIC3O60481 467 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 SEC31AO94979 1220 aaKnown RBP7.39□□□□□ -1.23
USP39-216ENST00000490193 PEPDP12955 493 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 MTHFD2P13995 350 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 PPP3CBP16298 524 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 PORP16435 677 aaPredicted RBP7.39□□□□□ -1.23
USP39-216ENST00000490193 NT5EP21589 574 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 DRD5P21918 477 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 CNTFP26441 200 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 GP5P40197 560 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 PPICP45877 212 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 XKP51811 444 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 B3GALT5-AS1P59052 145 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 RAB10P61026 200 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 OCRLQ01968 901 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 DLG1Q12959 904 aa7.39□□□□□ -1.23
USP39-216ENST00000490193 PDIA2Q13087 525 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms