RNA–Protein interactions for RNA: ENST00000488520.5

USP4-213, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 1,155 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-213ENST00000488520 ARRB2P32121 409 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 RPL3P39023 403 aaKnown RBP8.11□□□□□ -1.11
USP4-213ENST00000488520 ARFIP2P53365 341 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 GYS2P54840 703 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 HSD17B7P56937 341 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 STX1BP61266 288 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ERVK-8P63133 956 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 HSF1Q00613 529 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ALDH6A1Q02252 535 aaKnown RBP8.11□□□□□ -1.11
USP4-213ENST00000488520 ZNF763Q0D2J5 394 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 SERTAD2Q14140 314 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 BTBD16Q32M84 506 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 RFTN2Q52LD8 501 aaPredicted RBP8.11□□□□□ -1.11
USP4-213ENST00000488520 IL23RQ5VWK5 629 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 CES4AQ5XG92 561 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 GALNT18Q6P9A2 607 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 LANCL3Q6ZV70 420 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 MTERF4Q7Z6M4 381 aaKnown RBP8.11□□□□□ -1.11
USP4-213ENST00000488520 SPPL2CQ8IUH8 684 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 LRRC34Q8IZ02 419 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 SAMD14Q8IZD0 417 aaPredicted RBP8.11□□□□□ -1.11
USP4-213ENST00000488520 SHISA5Q8N114 240 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 BEST3Q8N1M1 668 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ARHGEF39Q8N4T4 335 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 AMER3Q8N944 861 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 FAM47BQ8NA70 645 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 PLPP5Q8NEB5 264 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 OR4K14Q8NGD5 310 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 C16orf78Q8WTQ4 265 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 TM4SF18Q96CE8 201 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 C14orf79Q96F83 325 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 THOC1Q96FV9 657 aaKnown RBP8.11□□□□□ -1.11
USP4-213ENST00000488520 C3orf30Q96M34 536 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 GPR137Q96N19 417 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ZBTB18Q99592 522 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 EBPLQ9BY08 206 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 RNF32Q9H0A6 362 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ZNF700Q9H0M5 742 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 TUBB1Q9H4B7 451 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 CCDC134Q9H6E4 229 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 MCCC2Q9HCC0 563 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 SIRT5Q9NXA8 310 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 DLGAP4Q9Y2H0 992 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ZNF835Q9Y2P0 537 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 MMACHCQ9Y4U1 282 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ASB4Q9Y574 426 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 PTGDR2Q9Y5Y4 395 aa8.11□□□□□ -1.11
USP4-213ENST00000488520 ANKHD1Q8IWZ3 2542 aaKnown RBP8.1□□□□□ -1.11
USP4-213ENST00000488520 LOC102723996A0A087X1L8 192 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 A0A0A6YYD5 115 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.1□□□□□ -1.11
USP4-213ENST00000488520 OR2W5A6NFC9 320 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 KIAA1324LA8MWY0 1029 aaPredicted RBP8.1□□□□□ -1.11
USP4-213ENST00000488520 NPIPB8E9PQR5 432 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 OR10H2O60403 315 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 DNAJB6O75190 326 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 ERAL1O75616 437 aaKnown RBP8.1□□□□□ -1.11
USP4-213ENST00000488520 SCELO95171 688 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 GPR75O95800 540 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 CYC1P08574 325 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 C8orf89P0DMQ9 161 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 NR2F6P10588 404 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 ICAM2P13598 275 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 RAB6AP20340 208 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 EPHA3P29320 983 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 MPIP34949 423 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 ART1P52961 327 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 OR4D2P58180 307 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 IRX1P78414 480 aaPredicted RBP8.1□□□□□ -1.11
USP4-213ENST00000488520 TNFRSF17Q02223 184 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 GSTA3Q16772 222 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 KRTAP21-3Q3LHN1 58 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 SLC9B1Q4ZJI4 515 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 NDUFAF5Q5TEU4 345 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 OR52E8Q6IFG1 317 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 TMEM205Q6UW68 189 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 EPGNQ6UW88 154 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 ZNF793Q6ZN11 406 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 LIX1Q8N485 282 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 NATD1Q8N6N6 113 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 VPS37AQ8NEZ2 397 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 OR2T11Q8NH01 316 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 ACTRT2Q8TDY3 377 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 CA5BP1Q8WTZ4 195 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 SDCCAG3Q96C92 435 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 IMMP1LQ96LU5 166 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 DGAT2Q96PD7 388 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 TSSK3Q96PN8 268 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 BBS4Q96RK4 519 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 TUBB6Q9BUF5 446 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 CCDC28BQ9BUN5 200 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 C1orf50Q9BV19 199 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 ALOXE3Q9BYJ1 711 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 DPY30Q9C005 99 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 AICDAQ9GZX7 198 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 FAM107BQ9H098 131 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 GSX1Q9H4S2 264 aaPredicted RBP8.1□□□□□ -1.11
USP4-213ENST00000488520 WDR55Q9H6Y2 383 aaPredicted RBP8.1□□□□□ -1.11
USP4-213ENST00000488520 KCNK13Q9HB14 408 aa8.1□□□□□ -1.11
USP4-213ENST00000488520 TCF7L2Q9NQB0 619 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms