RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PEX11GQ96HA9 241 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 C7orf34Q96L11 122 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 ZNF607Q96SK3 696 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 LRRN3Q9H3W5 708 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 BCL2L10Q9HD36 194 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 CDC14AQ9UNH5 594 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 C19orf53Q9UNZ5 99 aaPredicted RBP11.89□□□□□ -0.51
NELFE-209ENST00000488426 SATB2Q9UPW6 733 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 LIPT1Q9Y234 373 aa11.89□□□□□ -0.51
NELFE-209ENST00000488426 DUXAA6NLW8 204 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 A8MU76 341 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 DENRO43583 198 aaKnown RBP11.88□□□□□ -0.51
NELFE-209ENST00000488426 RPLP0P05388 317 aaKnown RBP11.88□□□□□ -0.51
NELFE-209ENST00000488426 RPSAP08865 295 aaKnown RBP11.88□□□□□ -0.51
NELFE-209ENST00000488426 NR2F1P10589 423 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 FOLR1P15328 257 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 MAN2A2P49641 1150 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 CRISP3P54108 245 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 ARSFP54793 590 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 GABREP78334 506 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 IGLV3-21P80748 117 aaPredicted RBP11.88□□□□□ -0.51
NELFE-209ENST00000488426 VLDLRP98155 873 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 ID2Q02363 134 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 MED21Q13503 144 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 MAPK11Q15759 364 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 TBC1D25Q3MII6 688 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 C3orf38Q5JPI3 329 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 FHL5Q5TD97 284 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 OR2T5Q6IEZ7 315 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 MFSD12Q6NUT3 480 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 CDC73Q6P1J9 531 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 FAM111BQ6SJ93 734 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 MED25Q71SY5 747 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 ZDHHC13Q8IUH4 622 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 OR2T29Q8NH02 315 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 GEMIN6Q8WXD5 167 aaKnown RBP11.88□□□□□ -0.51
NELFE-209ENST00000488426 DEPDC7Q96QD5 511 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 OR7D2Q96RA2 312 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 NDC1Q9BTX1 674 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 OSBPL11Q9BXB4 747 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 CALML5Q9NZT1 146 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 SCN2AQ99250 2005 aa11.88□□□□□ -0.51
NELFE-209ENST00000488426 A0A087WV48 116 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 C7orf72A4D263 438 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 G3V2T6 193 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 PDLIM1O00151 329 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 EI24O14681 340 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ZNF749O43361 778 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 OPN1SWP03999 348 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 NT5EP21589 574 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 HSD17B7P56937 341 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 MRPS35P82673 323 aaKnown RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 ACY1Q03154 408 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 SLC13A2Q13183 592 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 BIKQ13323 160 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 PRICKLE4Q2TBC4 344 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ATAD3BQ5T9A4 648 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ZCCHC12Q6PEW1 402 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ZNF574Q6ZN55 896 aaPredicted RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 ARHGAP22Q7Z5H3 698 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 KRT73Q86Y46 540 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 SLC44A2Q8IWA5 706 aaPredicted RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 OR51Q1Q8NH59 317 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 OR5K1Q8NHB7 308 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ZNF501Q96CX3 271 aaPredicted RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 C16orf58Q96GQ5 468 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 NR1H4Q96RI1 486 aaPredicted RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 TREX2Q9BQ50 279 aaPredicted RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 BTBD2Q9BX70 525 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ASCL3Q9NQ33 180 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 PRTFDC1Q9NRG1 225 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 THSD1Q9NS62 852 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 FGF21Q9NSA1 209 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 MAT2BQ9NZL9 334 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ABCG2Q9UNQ0 655 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 AP4B1Q9Y6B7 739 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 PRAMEF27A3QJZ7 478 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 hCG_2039718K7EN88 272 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 DSCR3O14972 297 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 OR10H2O60403 315 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 SERPINB7O75635 380 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 MFN2O95140 757 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 HPRP00739 348 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ETS2P15036 469 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ITGA2P17301 1181 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 SOX18P35713 384 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 MAT1AQ00266 395 aaKnown RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 MAP4K2Q12851 820 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 SYPL1Q16563 259 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 IQCCQ4KMZ1 466 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 RPS26P11Q5JNZ5 115 aaPredicted RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 RBM44Q6ZP01 1051 aaKnown RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 TTLL10Q6ZVT0 673 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 HIPK1Q86Z02 1210 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ST13P4Q8IZP2 240 aaPredicted RBP11.87□□□□□ -0.51
NELFE-209ENST00000488426 SHISA5Q8N114 240 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 C7orf57Q8NEG2 295 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 SPPL2AQ8TCT8 520 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 ADAMTS15Q8TE58 950 aa11.87□□□□□ -0.51
NELFE-209ENST00000488426 FGF11Q92914 225 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms