RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 KLHL42Q9P2K6 505 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 CSNK1G3Q9Y6M4 447 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 TMEM129A0AVI4 362 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 NDUFA2O43678 99 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 TLX2O43763 284 aaPredicted RBP13.42□□□□□ -0.26
RER1-207ENST00000488353 MPC2O95563 127 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 SOD1P00441 154 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 AP1S2P56377 157 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 ZNF630Q2M218 657 aaPredicted RBP13.42□□□□□ -0.26
RER1-207ENST00000488353 TRIM40Q6P9F5 258 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 Q6ZVL8 140 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 OR4K3Q96R72 315 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 ABCG5Q9H222 651 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 C1GALT1Q9NS00 363 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 SPATA6Q9NWH7 488 aaPredicted RBP13.42□□□□□ -0.26
RER1-207ENST00000488353 CHD9Q3L8U1 2897 aa13.42□□□□□ -0.26
RER1-207ENST00000488353 HELZP42694 1942 aaKnown RBP13.42□□□□□ -0.26
RER1-207ENST00000488353 A0A1B0GVI7 797 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 MGAT4DA6NG13 374 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 TUBAL3A6NHL2 446 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 H3BUI4 141 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 ZP3P21754 424 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 BMP8BP34820 402 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 DSG2Q14126 1118 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 POM121L1PQ3SYA9 428 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 OR2G6Q5TZ20 316 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 AGTRAPQ6RW13 159 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 HSD11B1LQ7Z5J1 315 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 BMP8AQ7Z5Y6 402 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 OXR1Q8N573 874 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 SRFBP1Q8NEF9 429 aaKnown RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 CLP1Q92989 425 aaKnown RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 NXPE2Q96DL1 559 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 C11orf24Q96F05 449 aaPredicted RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 PKP4Q99569 1192 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 SLC35A5Q9BS91 424 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 POLR2J3Q9H1A7 115 aaKnown RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 TVP23BQ9NYZ1 205 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 ATP6V1HQ9UI12 483 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 A0A1W2PPL8 197 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 SAP18O00422 153 aaKnown RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 SGTAO43765 313 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 OR10H3O60404 316 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 MOSPD3O75425 235 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 GAAP10253 952 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 CTNNB1P35222 781 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 CSTF1Q05048 431 aaKnown RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 EEF1A2Q05639 463 aaKnown RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 PUDPQ08623 228 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 SP140Q13342 867 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 ARHGAP15Q53QZ3 475 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 SLC25A30Q5SVS4 291 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 DCST1Q5T197 706 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 GOT1L1Q8NHS2 421 aaPredicted RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 CEP76Q8TAP6 659 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 ASZ1Q8WWH4 475 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 SORCS1Q8WY21 1168 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 ST8SIA4Q92187 359 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 OR2M2Q96R28 347 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 OR51J1Q9H342 316 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 EXO1Q9UQ84 846 aaKnown RBP13.41□□□□□ -0.26
RER1-207ENST00000488353 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 INSL6Q9Y581 213 aa13.41□□□□□ -0.26
RER1-207ENST00000488353 TRAV6A0A075B6T7 132 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 FFAR1O14842 300 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 SLC16A5O15375 505 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 LRRTM2O43300 516 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 SH3BP5O60239 455 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 FGBP02675 491 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 RHOP08100 348 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 CXCL3P19876 107 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 SSTR2P30874 369 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 PCBP3P57721 371 aaKnown RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 RPS13P62277 151 aaKnown RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 HBA1P69905 142 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 ZNF385BQ569K4 471 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 SYT14P1Q58G82 188 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 RAET1GQ6H3X3 334 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 LIPIQ6XZB0 460 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 ASB18Q6ZVZ8 466 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 POF1BQ8WVV4 589 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 ING5Q8WYH8 240 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 RFT1Q96AA3 541 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 THAP7Q9BT49 309 aaPredicted RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 POLDIP3Q9BY77 421 aaKnown RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 NUDT15Q9NV35 164 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 WBP1LQ9NX94 342 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 STOX2Q9P2F5 926 aaPredicted RBP13.4□□□□□ -0.26
RER1-207ENST00000488353 ACSL6Q9UKU0 697 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 IRGMA1A4Y4 181 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 CARNS1A5YM72 827 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 TSPAN6O43657 245 aa13.4□□□□□ -0.26
RER1-207ENST00000488353 PRKYO43930 277 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms