RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PRSS48Q7RTY5 328 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 SIAH3Q8IW03 269 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 CCDC170Q8IYT3 715 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 NUP93Q8N1F7 819 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 TMCO5AQ8N6Q1 288 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 RFESDQ8TAC1 157 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 MARC2Q969Z3 335 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 JPH2Q9BR39 696 aaPredicted RBP2.32□□□□□ -2.04
CCDC66-221ENST00000487739 OSBPL8Q9BZF1 889 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 OPN3Q9H1Y3 402 aaPredicted RBP2.32□□□□□ -2.04
CCDC66-221ENST00000487739 C2orf40Q9H1Z8 148 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 ESM1Q9NQ30 184 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 CWC25Q9NXE8 425 aaPredicted RBP2.32□□□□□ -2.04
CCDC66-221ENST00000487739 TUBGCP4Q9UGJ1 667 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 SLC2A6Q9UGQ3 507 aa2.32□□□□□ -2.04
CCDC66-221ENST00000487739 MRTO4Q9UKD2 239 aaKnown RBP2.32□□□□□ -2.04
CCDC66-221ENST00000487739 C13orf42A0A1B0GVH6 325 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 A0A1W2PQ67 120 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 ERVV-1B6SEH8 477 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 CYB561D2O14569 222 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 TYROBPO43914 113 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 GPX5O75715 221 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 OAS1P00973 400 aaKnown RBP2.31□□□□□ -2.04
CCDC66-221ENST00000487739 CHRNGP07510 517 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 VCLP18206 1134 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 CTNNA1P35221 906 aaKnown RBP2.31□□□□□ -2.04
CCDC66-221ENST00000487739 UGT1A3P35503 534 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 TNFSF10P50591 281 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 SMSP52788 366 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 VCPP55072 806 aaKnown RBP2.31□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF45Q02386 682 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 RPS6KA1Q15418 735 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 TRADDQ15628 312 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 CD226Q15762 336 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 KCTD19Q17RG1 926 aaPredicted RBP2.31□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF674Q2M3X9 581 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF528Q3MIS6 628 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 SLC39A12Q504Y0 691 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 GLRA4Q5JXX5 417 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 IYDQ6PHW0 289 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 ADAMTSL5Q6ZMM2 481 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 IQCA1Q86XH1 822 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 TMEM126BQ8IUX1 230 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 LINC00518Q8N0U6 118 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 OR6M1Q8NGM8 313 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 PTP4A1Q93096 173 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 IL22RA2Q969J5 263 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 VMP1Q96GC9 406 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 NTMT1Q9BV86 223 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 HCAR1Q9BXC0 346 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 DCTPP1Q9H773 170 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 RNPEPL1Q9HAU8 725 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 LEF1Q9UJU2 399 aaPredicted RBP2.31□□□□□ -2.04
CCDC66-221ENST00000487739 KCNK6Q9Y257 313 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 SLC9A8Q9Y2E8 581 aa2.31□□□□□ -2.04
CCDC66-221ENST00000487739 ZNFX1Q9P2E3 1918 aaKnown RBP2.3□□□□□ -2.04
CCDC66-221ENST00000487739 C5orf51A6NDU8 294 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 WWP2O00308 870 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 FMO6PO60774 539 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 AKAP3O75969 853 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 PDE5AO76074 875 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 CCNE1P24864 410 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 CTNNB1P35222 781 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 STX1BP61266 288 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 KRT83P78385 493 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF789Q5FWF6 425 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 KCTD11Q693B1 232 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF561Q8N587 486 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 RDH11Q8TC12 318 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 RNASE8Q8TDE3 154 aaKnown RBP2.3□□□□□ -2.04
CCDC66-221ENST00000487739 COG3Q96JB2 828 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 DDX50Q9BQ39 737 aaKnown RBP2.3□□□□□ -2.04
CCDC66-221ENST00000487739 SLC5A7Q9GZV3 580 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 ALDH8A1Q9H2A2 487 aaPredicted RBP2.3□□□□□ -2.04
CCDC66-221ENST00000487739 PNPLA3Q9NST1 481 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF221Q9UK13 617 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 NOL7Q9UMY1 257 aaKnown RBP2.3□□□□□ -2.04
CCDC66-221ENST00000487739 STX8Q9UNK0 236 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 EXOC7Q9UPT5 735 aa2.3□□□□□ -2.04
CCDC66-221ENST00000487739 IGKV2-28A0A075B6P5 120 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 IGKV2D-24A0A075B6R9 120 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 A0A1W2PRV1 198 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 LRRD1A4D1F6 860 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 YJEFN3A6XGL0 299 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 GMNNO75496 209 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 IGKV2D-28P01615 120 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 HMOX1P09601 288 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 SAA4P35542 130 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 CAV2P51636 162 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 ZNF85Q03923 595 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 KLF5Q13887 457 aaPredicted RBP2.29□□□□□ -2.04
CCDC66-221ENST00000487739 ZIC1Q15915 447 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 SHROOM1Q2M3G4 852 aaPredicted RBP2.29□□□□□ -2.04
CCDC66-221ENST00000487739 SMU1Q2TAY7 513 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 MPPE1Q53F39 396 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 IFI44LQ53G44 452 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 CCDC91Q7Z6B0 441 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 SFRP1Q8N474 314 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 ST7LQ8TDW4 575 aa2.29□□□□□ -2.04
CCDC66-221ENST00000487739 UBTD2Q8WUN7 234 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms