RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 POMZP3Q6PJE2 187 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 LACC1Q8IV20 430 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 PM20D2Q8IYS1 436 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 GBP7Q8N8V2 638 aaPredicted RBP22.39■■□□□ 1.17
LIME1-206ENST00000487026 OR9A2Q8NGT5 310 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 TMBIM1Q969X1 311 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 RHOXF2Q9BQY4 288 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 OSBPL11Q9BXB4 747 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 EBPLQ9BY08 206 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 EPB41L4BQ9H329 900 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 SERHLQ9NQF3 203 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 GPR55Q9Y2T6 319 aaPredicted RBP22.39■■□□□ 1.17
LIME1-206ENST00000487026 KIAA1549Q9HCM3 1950 aa22.39■■□□□ 1.17
LIME1-206ENST00000487026 DVL2O14641 736 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 SNPHO15079 494 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 REM1O75628 298 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 IL2RAP01589 272 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 DRD2P14416 443 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 TIMP3P35625 211 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 AGFG1P52594 562 aaKnown RBP22.38■■□□□ 1.17
LIME1-206ENST00000487026 DCAF7P61962 342 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 ACSM2AQ08AH3 577 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 LCP2Q13094 533 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 ACSM2BQ68CK6 577 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 LCA5Q86VQ0 697 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 SLC22A9Q8IVM8 553 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 CCNYL1Q8N7R7 359 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 CEP112Q8N8E3 955 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 RDH11Q8TC12 318 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 L3HYPDHQ96EM0 354 aa22.38■■□□□ 1.17
LIME1-206ENST00000487026 FRG2CA6NGY1 282 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 CDH16O75309 829 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 KIR2DL3P43628 341 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 ZNF136P52737 540 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 CORO7P57737 925 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 SPIN4Q56A73 249 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 NSUN5P2Q63ZY6 315 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 TMEM81Q6P7N7 255 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 WDSUB1Q8N9V3 476 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 KIF18AQ8NI77 898 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 ZNF675Q8TD23 568 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 MZB1Q8WU39 189 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 TXLNGYQ9BZA5 131 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 GSTO2Q9H4Y5 243 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 DNAJB12Q9NXW2 375 aaKnown RBP22.37■■□□□ 1.17
LIME1-206ENST00000487026 CRIM1Q9NZV1 1036 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 PSMC3IPQ9P2W1 217 aaPredicted RBP22.37■■□□□ 1.17
LIME1-206ENST00000487026 EMCNQ9ULC0 261 aa22.37■■□□□ 1.17
LIME1-206ENST00000487026 EXO1Q9UQ84 846 aaKnown RBP22.37■■□□□ 1.17
LIME1-206ENST00000487026 A0A1W2PPM1 405 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 PRAMEF25A6NGN4 478 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 UBFD1O14562 309 aaKnown RBP22.36■■□□□ 1.17
LIME1-206ENST00000487026 TO15178 435 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 TIA1P31483 386 aaKnown RBP eCLIP22.36■■□□□ 1.17
LIME1-206ENST00000487026 DNAJA1P31689 397 aaKnown RBP22.36■■□□□ 1.17
LIME1-206ENST00000487026 ASCL1P50553 236 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 FOXA1P55317 472 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 PKNOX1P55347 436 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 SNTA1Q13424 505 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 PRSS53Q2L4Q9 553 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 SPNS3Q6ZMD2 512 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 GSPT2Q8IYD1 628 aaKnown RBP22.36■■□□□ 1.17
LIME1-206ENST00000487026 ACMSDQ8TDX5 336 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 COL21A1Q96P44 957 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 ADOQ96SZ5 270 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 SH3GL2Q99962 352 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 MID1IP1Q9NPA3 183 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 SLC35C2Q9NQQ7 365 aa22.36■■□□□ 1.17
LIME1-206ENST00000487026 ZNF629Q9UEG4 869 aaPredicted RBP22.36■■□□□ 1.17
LIME1-206ENST00000487026 CTAG2O75638 210 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 CBR3O75828 277 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 BCAS2O75934 225 aaPredicted RBP22.35■■□□□ 1.17
LIME1-206ENST00000487026 ENO1P06733 434 aaKnown RBP22.35■■□□□ 1.17
LIME1-206ENST00000487026 GSTA1P08263 222 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 ANXA4P09525 319 aaPredicted RBP22.35■■□□□ 1.17
LIME1-206ENST00000487026 CT45A8P0DMV1 189 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 CT45A9P0DMV2 189 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 HEPACAMQ14CZ8 416 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 SF3B4Q15427 424 aaKnown RBP eCLIP22.35■■□□□ 1.177e-24■■■■□ 26
LIME1-206ENST00000487026 CT45A2Q5DJT8 189 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 SPDYAQ5MJ70 313 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 OR14L1PQ8NHC6 308 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 CDC26Q8NHZ8 85 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 TMCO6Q96DC7 493 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 C11orf24Q96F05 449 aaPredicted RBP22.35■■□□□ 1.17
LIME1-206ENST00000487026 BTBD9Q96Q07 612 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 FETUBQ9UGM5 382 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 DCDC2Q9UHG0 476 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 STK38LQ9Y2H1 464 aa22.35■■□□□ 1.17
LIME1-206ENST00000487026 OR6C70A6NIJ9 312 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 CD8B2A6NJW9 211 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 G3V2L1 256 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 KIF2AO00139 706 aaPredicted RBP22.34■■□□□ 1.17
LIME1-206ENST00000487026 ERN1O75460 977 aaKnown RBP22.34■■□□□ 1.17
LIME1-206ENST00000487026 SLCO1A2P46721 670 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 ART1P52961 327 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 SRYQ05066 204 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 C2orf80Q0P641 193 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 ERCC6LQ2NKX8 1250 aa22.34■■□□□ 1.17
LIME1-206ENST00000487026 OR5M10Q6IEU7 315 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms