RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 ACTRT2Q8TDY3 377 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 CKAP2Q8WWK9 683 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 TESCQ96BS2 214 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 LMF2Q9BU23 707 aaKnown RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 BHLHE41Q9C0J9 482 aaPredicted RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 ANKRA2Q9H9E1 313 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 FOLH1BQ9HBA9 442 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 INTS9Q9NV88 658 aaKnown RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 ATAD3AQ9NVI7 634 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 AIG1Q9NVV5 245 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 TAS2R9Q9NYW1 312 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 SH3BP4Q9P0V3 963 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 CNOT11Q9UKZ1 510 aaKnown RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 VPS4AQ9UN37 437 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 ARHGAP21Q5T5U3 1957 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 SPTAN1Q13813 2472 aaKnown RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 SPTBN1Q01082 2364 aaKnown RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 UQCRHLA0A096LP55 91 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 SCN2BO60939 215 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 ERN1O75460 977 aaKnown RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 PPM1BO75688 479 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 ABCB1P08183 1280 aaPredicted RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 MEOX1P50221 254 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 CDK9P50750 372 aaKnown RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 WNT3P56703 355 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 CPTPQ5TA50 214 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 SLC22A10Q63ZE4 541 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 TMEM107Q6UX40 140 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 NPSR1Q6W5P4 371 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 SLC34A3Q8N130 599 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 CPSF7Q8N684 471 aaKnown RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 OR10G3Q8NGC4 313 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 SPPL2AQ8TCT8 520 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 GIMAP5Q96F15 307 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 SLC35A4Q96G79 324 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 PPP1R36Q96LQ0 422 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 PRPF18Q99633 342 aaKnown RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 SACM1LQ9NTJ5 587 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 MARCOQ9UEW3 520 aaPredicted RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 GPR45Q9Y5Y3 372 aa12.11□□□□□ -0.47
SF1-216ENST00000486867 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
SF1-216ENST00000486867 A0A0G2JMM0 328 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 A0A1W2PPB8 328 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 A0A1W2PRS3 328 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 PINLYPA6NC86 204 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 ANKUB1A6NFN9 424 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 OR6C70A6NIJ9 312 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 KIR3DP1A8MWS1 328 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 TSPAN2O60636 221 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 WISP2O76076 250 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 GNLYP22749 145 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 EPHA3P29320 983 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 MRPL19P49406 292 aaKnown RBP12.1□□□□□ -0.47
SF1-216ENST00000486867 MANFP55145 182 aaKnown RBP12.1□□□□□ -0.47
SF1-216ENST00000486867 CORO7P57737 925 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 KCNC4Q03721 635 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 DPY19L1Q2PZI1 675 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 CYP27C1Q4G0S4 372 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 SLC9B1Q4ZJI4 515 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 KRTCAP3Q53RY4 240 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 TBCELQ5QJ74 424 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 EPGNQ6UW88 154 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 TMEM64Q6YI46 380 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 GK5Q6ZS86 529 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 NUP54Q7Z3B4 507 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 OR5P2Q8WZ92 322 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 HGDQ93099 445 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 OMA1Q96E52 524 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 GPR137Q96N19 417 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 ANGPTL4Q9BY76 406 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 CLMPQ9H6B4 373 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 WDR55Q9H6Y2 383 aaPredicted RBP12.1□□□□□ -0.47
SF1-216ENST00000486867 ZDHHC11Q9H8X9 412 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 DDX18Q9NVP1 670 aaKnown RBP12.1□□□□□ -0.47
SF1-216ENST00000486867 USH1CQ9Y6N9 552 aa12.1□□□□□ -0.47
SF1-216ENST00000486867 A0A1W2PRB8 838 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 RNASET2O00584 256 aaKnown RBP12.09□□□□□ -0.47
SF1-216ENST00000486867 TP53I11O14683 189 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 ABCB7O75027 752 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 TRIM3O75382 744 aaPredicted RBP12.09□□□□□ -0.47
SF1-216ENST00000486867 P04436 131 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 KITP10721 976 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 ZNF24P17028 368 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 CLNS1AP54105 237 aaKnown RBP12.09□□□□□ -0.47
SF1-216ENST00000486867 PNLIPRP2P54317 469 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 FBXW4P57775 412 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 PHC1P78364 1004 aa12.09□□□□□ -0.47
SF1-216ENST00000486867 ALDH6A1Q02252 535 aaKnown RBP12.09□□□□□ -0.47
SF1-216ENST00000486867 SRSF11Q05519 484 aaKnown RBP12.09□□□□□ -0.47
SF1-216ENST00000486867 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
SF1-216ENST00000486867 HSPB3Q12988 150 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms