RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CKMT1AP12532 417 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 COL9A1P20849 921 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 GSTM3P21266 225 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 SOX6P35712 828 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 RPS15AP62244 130 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 BTN3A2P78410 334 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 CDK5Q00535 292 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 ZNF45Q02386 682 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 GINS1Q14691 196 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 SPHARQ15513 63 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 ZNF181Q2M3W8 571 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 ZNF311Q5JNZ3 666 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 Q7L0L9 218 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 VN1R4Q7Z5H5 301 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 BCDIN3DQ7Z5W3 292 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 CLIP4Q8N3C7 705 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 OR1E3Q8WZA6 343 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 GPA33Q99795 319 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 ARHGDIGQ99819 225 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 QRSL1Q9H0R6 528 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 CLEC2DQ9UHP7 191 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 LIPT1Q9Y234 373 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 PEX16Q9Y5Y5 336 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 BRWD1Q9NSI6 2320 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 A0A1W2PQF6 199 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ADAM23O75077 832 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 GPX5O75715 221 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ALPPP05187 535 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 NR2F6P10588 404 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ENDOUP21128 410 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 GIPRP48546 466 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 RPS3AP61247 264 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 LSM11P83369 360 aaKnown RBP eCLIP16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ATAT1Q5SQI0 421 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ENPP7Q6UWV6 458 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 MTSS1LQ765P7 747 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 SLC22A16Q86VW1 577 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 LYSMD2Q8IV50 215 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 NANOGP1Q8N7R0 232 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 EQTNQ9NQ60 294 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 CTPS2Q9NRF8 586 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 UGT2A1Q9Y4X1 527 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 BTN3A3O00478 584 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 TLX2O43763 284 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 HOXB2P14652 356 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 CLDN2P57739 230 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 EFNB1P98172 346 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 CHRNEQ04844 493 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 RGS1Q08116 209 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 HYAL1Q12794 435 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 INAVAQ3KP66 663 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ASPGQ86U10 573 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 TRIM69Q86WT6 500 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 KCT2Q8NC54 265 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 PROKR2Q8NFJ6 384 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 NT5CQ8TCD5 201 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 FGF11Q92914 225 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ACTRT3Q9BYD9 372 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ANKRA2Q9H9E1 313 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 ABCB10Q9NRK6 738 aa16.88■□□□□ 0.29
PDLIM7-207ENST00000486828 SPTBN5Q9NRC6 3674 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 MDC1Q14676 2089 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 A0A087WUU8 490 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 ZNF888P0CJ79 500 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 ACADMP11310 421 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 AK4P27144 223 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 SMSP52788 366 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 TAS2R41P59536 307 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 LTB4RQ15722 352 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 SYT14P1Q58G82 188 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 C1QTNF12Q5T7M4 302 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 ATAD3BQ5T9A4 648 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 AGAP7PQ5VUJ5 663 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 ACSM5Q6NUN0 579 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 VRK2Q86Y07 508 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 GJD3Q8N144 294 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 CACTIN-AS1Q8N1I8 211 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 PARP16Q8N5Y8 322 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 GNPDA2Q8TDQ7 276 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 SLC22A18Q96BI1 424 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 GIMAP5Q96F15 307 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 C10orf90Q96M02 699 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 FCRL4Q96PJ5 515 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 ZNF624Q9P2J8 865 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 SLC13A4Q9UKG4 626 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 SCML1Q9UN30 329 aa16.87■□□□□ 0.29
PDLIM7-207ENST00000486828 KLF8O95600 359 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 SOX3P41225 446 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 NFATC4Q14934 902 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 GDPGP1Q6ZNW5 385 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 C16orf62Q7Z3J2 963 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 KIF18BQ86Y91 864 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 KAT2AQ92830 837 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 LRR1Q96L50 414 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 ZNF582Q96NG8 517 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 SRMSQ9H3Y6 488 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 SP140LQ9H930 580 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 POLE4Q9NR33 117 aa16.86■□□□□ 0.29
PDLIM7-207ENST00000486828 SEC14L4Q9UDX3 406 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms