RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 GSAPA4D1B5 854 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 FAM170BA6NMN3 283 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 PRODHO43272 600 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 GPR37L1O60883 481 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 PTP4A3O75365 173 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 NME6O75414 186 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 C8GP07360 202 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 NMBP08949 121 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 CD3GP09693 182 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 CXCL2P19875 107 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 TYMPP19971 482 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 MMP11P24347 488 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 RBMS1P29558 406 aaKnown RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 TIA1P31483 386 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SOAT1P35610 550 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 PIN1Q13526 163 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ETFDHQ16134 617 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ZSWIM7Q19AV6 140 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 HSD17B12Q53GQ0 312 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 EOGTQ5NDL2 527 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ARMC12Q5T9G4 340 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 REEP3Q6NUK4 255 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 PODNL1Q6PEZ8 512 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 C17orf107Q6ZR85 190 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ZER1Q7Z7L7 766 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 TOMM5Q8N4H5 51 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ATAD1Q8NBU5 361 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 OR6K2Q8NGY2 324 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 GIMAP5Q96F15 307 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 TEFMQ96QE5 360 aaKnown RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 FERD3LQ96RJ6 166 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SECISBP2Q96T21 854 aaKnown RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 DDOQ99489 341 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 DPYSL5Q9BPU6 564 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SORBS1Q9BX66 1292 aaKnown RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 CBLCQ9ULV8 474 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 FCF1Q9Y324 198 aaKnown RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 KLF2Q9Y5W3 355 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 C17orf102A2RUQ5 167 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 ALDOBP05062 364 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 ANKRD34CP0C6C1 535 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 CCND3P30281 292 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 ACSL1P33121 698 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 THBS2P35442 1172 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 NSG1P42857 185 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 KIAA1024LP59773 190 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 B4GALNT1Q00973 533 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SEMG2Q02383 582 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 RIPPLY1Q0D2K3 151 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF177Q13360 481 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 TCTE1Q5JU00 501 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SLC36A4Q6YBV0 504 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 RRM2BQ7LG56 351 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 FGD2Q7Z6J4 655 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 MEX3DQ86XN8 651 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 OR4F15Q8NGB8 312 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 COQ8AQ8NI60 647 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 MRPS31Q92665 395 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 PELOQ9BRX2 385 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 PLA2G12AQ9BZM1 189 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 CHIAQ9BZP6 476 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SPRTNQ9H040 489 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 TMEM168Q9H0V1 697 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 CD93Q9NPY3 652 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 FBXL2Q9UKC9 423 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 PRELID3BQ9Y3B1 194 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 TDRD15B5MCY1 1934 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 IRGMA1A4Y4 181 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 H0YIV9 168 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 DNASE2O00115 360 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF593O00488 134 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 UGDHO60701 494 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 PLATP00750 562 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 BCHEP06276 602 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 FGF2P09038 288 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 UGT2B7P16662 529 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 NPR2P20594 1047 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 DRD5P21918 477 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 HNF1BP35680 557 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SLC6A11P48066 632 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 RPS13P62277 151 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 RPS26P62854 115 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 TUSC3Q13454 348 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 GRIN2CQ14957 1233 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 CDKN3Q16667 212 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF791Q3KP31 576 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 MINDY4Q4G0A6 757 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SFRP5Q5T4F7 317 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 HBMQ6B0K9 141 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 CXorf57Q6NSI4 855 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 FAM180BQ6P0A1 224 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 BTN2A1Q7KYR7 527 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 PRICKLE2Q7Z3G6 844 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 THOC6Q86W42 341 aaKnown RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 TRPV1Q8NER1 839 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SLC38A5Q8WUX1 472 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 SPRYD4Q8WW59 207 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms