RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ZNF311Q5JNZ3 666 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.07■□□□□ 0.64
HPS3-206ENST00000486530 ZNF438Q7Z4V0 828 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 IQCHQ86VS3 1027 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 CCDC103Q8IW40 242 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 DEFB119Q8N690 84 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 C19orf47Q8N9M1 422 aaKnown RBP19.07■□□□□ 0.64
HPS3-206ENST00000486530 SLC7A13Q8TCU3 470 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 NR4A3Q92570 626 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 SLC35A4Q96G79 324 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 SCN2AQ99250 2005 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 FUNDC2Q9BWH2 189 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 IL21RQ9HBE5 538 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 PSORS1C1Q9UIG5 152 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 SLC13A4Q9UKG4 626 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 A0A1W2PPW3 197 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 A0A1W2PR77 199 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 ATP1B1P05026 303 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 CDH3P22223 829 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 CTSKP43235 329 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 MAP2K4P45985 399 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 FASLGP48023 281 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 NFATC3Q12968 1075 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 PGBD2Q6P3X8 592 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 GKN2Q86XP6 184 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 ANKRD13BQ86YJ7 626 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 GJD3Q8N144 294 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 CA13Q8N1Q1 262 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 DNAJC22Q8N4W6 341 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 MYDGFQ969H8 173 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 FKBP10Q96AY3 582 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 ARHGDIGQ99819 225 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 COPS4Q9BT78 406 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 ACOT13Q9NPJ3 140 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 ENPP5Q9UJA9 477 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 CYR61O00622 381 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 UBXN7O94888 489 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 FADS2O95864 444 aaKnown RBP19.06■□□□□ 0.64
HPS3-206ENST00000486530 IFI6P09912 130 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 PRKAR1BP31321 381 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 MAZP56270 477 aaKnown RBP19.06■□□□□ 0.64
HPS3-206ENST00000486530 SHC2P98077 582 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 SYT6Q5T7P8 510 aaPredicted RBP19.06■□□□□ 0.64
HPS3-206ENST00000486530 CCDC81Q6ZN84 652 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 HMGN2P46Q86SG4 172 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 TMEFF1Q8IYR6 380 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 SLC16A11Q8NCK7 471 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 CADM4Q8NFZ8 388 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 TANKQ92844 425 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 BCL7BQ9BQE9 202 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 QRSL1Q9H0R6 528 aaKnown RBP19.06■□□□□ 0.64
HPS3-206ENST00000486530 UCK1Q9HA47 277 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 FKBP14Q9NWM8 211 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 REV1Q9UBZ9 1251 aa19.06■□□□□ 0.64
HPS3-206ENST00000486530 CLCA1A8K7I4 914 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 FGF17O60258 216 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 GPR75O95800 540 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 ACVR2AP27037 513 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 MAPK10P53779 464 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 ILKQ13418 452 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 OR5T3Q8NGG3 340 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 FCGR1BQ92637 280 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 CDS1Q92903 461 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 FAM60AQ9NP50 221 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 C19orf53Q9UNZ5 99 aaPredicted RBP19.05■□□□□ 0.64
HPS3-206ENST00000486530 CEP192Q8TEP8 1941 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 A0A087WV62 115 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 NME6O75414 186 aaPredicted RBP19.05■□□□□ 0.64
HPS3-206ENST00000486530 PDX1P52945 283 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 RAB38P57729 211 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 RACK1P63244 317 aaKnown RBP19.05■□□□□ 0.64
HPS3-206ENST00000486530 NDUFA9Q16795 377 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 FHL5Q5TD97 284 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 PODNL1Q6PEZ8 512 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 SLC16A12Q6ZSM3 486 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 WDR53Q7Z5U6 358 aaPredicted RBP19.05■□□□□ 0.64
HPS3-206ENST00000486530 VRK2Q86Y07 508 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 UBALD2Q8IYN6 164 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 CAMKK1Q8N5S9 505 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 SLC9A6Q92581 669 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 CACYBPQ9HB71 228 aaKnown RBP19.05■□□□□ 0.64
HPS3-206ENST00000486530 MAN2C1Q9NTJ4 1040 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 KLHL28Q9NXS3 571 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 DOLKQ9UPQ8 538 aa19.05■□□□□ 0.64
HPS3-206ENST00000486530 TMX2-CTNND1H3BSU7 103 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 TLR4O00206 839 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 STK25O00506 426 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 LDB3O75112 727 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 CDK4P11802 303 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 CAPZBP47756 277 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 ST13P50502 369 aaKnown RBP19.04■□□□□ 0.64
HPS3-206ENST00000486530 ID2Q02363 134 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 TARDBPQ13148 414 aaKnown RBP eCLIP19.04■□□□□ 0.64
HPS3-206ENST00000486530 ARHGAP11BQ3KRB8 267 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 FRRS1Q6ZNA5 592 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 ARL14Q8N4G2 192 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 TMEM52Q8NDY8 209 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 ZNF675Q8TD23 568 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 LMX1AQ8TE12 382 aa19.04■□□□□ 0.64
HPS3-206ENST00000486530 ANKHQ9HCJ1 492 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms